Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00368 ATGGGTCGGCTTAATCTCATACTTGTGTGGTCGCTCTCATTAACACTGTCCCTTTATAATCTACATACAACCTCTGCCCAGCTTAGTCCAAACCACTACGCTAATGTATGCCCCAATCTCGAAAGCATCGTCAGACAGGTAGTTACCACCAAGTTCCAGCAAACCTTTGTCACTGTTCCAGCCACCCTTCGTCTCTTCTTCCACGATTGCTTTGTCCAGTCACCTTATCTCTACAAATTTGACATTGTGAAAGAAATCAAGGGTTGTGATGCGTCGGTTTTGGTGGCATCTACTGGGAACAACCAAGCGGAGAAGGATCACCCAGACAATCTTTCATTGGCAGGTGATGGATTTGACACGGTGATCAAAGCAAAAGCTGCAGTAGATGCTGTCCCTCAGTGCAGGAACAAAGTCTCTTGTGCTGATATTTTGGCCTTGGCTACCCGTGATGTTATCGTACTGTCTGGTGGACCTTCGTATACCGTTGAATTGGGAAGGTTTGATGGGTTAGTTTCAAGAGCTTCTGATGTAAATGGAAGGCTTCCGCATCCCACGTTCAATTTGAACCAGCTCAACTCCCTTTTTGCTGCAAATGGACTCACCCAAACTGATATGATTGCTCTCTCAGGTGCACACACCCTTGGATTCTCCCACTGCAGCAAGTTCTCGAATAGAATATATAACTTCAATGGGCAAACTCCAGTGGACCCATCATTGAACAGGCAATACGCAATCCAATTGCAACAGATGTGCCCGAGGAACGTGGATCCAAGGATTGCCATTAACATGGACCCAACCACTCCCAGAAGATTCGATAACGTTTATTACCAAAACCTCCAACAAGGAAAGGGCCTTTTCACCTCGGATCAAATCCTCTTCACTGACCAAAGGTCCAGGAACACTGTTAATTCCTTTGCTTCAAATGCTAACGTTTTCAACTCTAACTTCATTGCTGCTATCACCAAATTGGGTCGTGTTGGAGTTAAGACAGCAAGAAATGGAAAAATTCGTACCGATTGTTCTGTGCTTTAA 1032 0.4506 MGRLNLILVWSLSLTLSLYNLHTTSAQLSPNHYANVCPNLESIVRQVVTTKFQQTFVTVPATLRLFFHDCFVQSPYLYKFDIVKEIKGCDASVLVASTGNNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIVLSGGPSYTVELGRFDGLVSRASDVNGRLPHPTFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCSKFSNRIYNFNGQTPVDPSLNRQYAIQLQQMCPRNVDPRIAINMDPTTPRRFDNVYYQNLQQGKGLFTSDQILFTDQRSRNTVNSFASNANVFNSNFIAAITKLGRVGVKTARNGKIRTDCSVL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00368 343 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vimu11g00368 343 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 FunFam Peroxidase 182 323 - -
Vimu11g00368 343 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 SUPERFAMILY Heme-dependent peroxidases 27 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 ProSiteProfiles Plant heme peroxidase family profile. 27 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 PANTHER - 11 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Vimu11g00368 343 Gene3D Peroxidase, domain 2 182 323 - -
Vimu11g00368 343 Pfam Peroxidase 44 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00368 343 CDD secretory_peroxidase 27 342 IPR033905 GO:0004601|GO:0042744
Vimu11g00368 343 Gene3D - 31 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00368 Vimu-Chr11 3935822 3938224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00368 1 343 Peroxidase AT5G67400 65.015 9.61e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00368 K00430 - gmx:100819937 572.007