Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00360 ATGGTTTCACCAAAATCCCTGCCAGAGACACTAAGGTTGTACCCTGTTGCACCTTTGGTGGTACCTCGTGAGTGTAGAGAAGATGTTACTATAGATGGTTATTGCATAAAGAAAAAGTCAAGAGTGATAGTGAATGCATGGGCTTTGGGGAGAGATTCTAAAGTTTGGTCAGATAATGCTGAGGAGTTTTGTCCTGAAAGATTTTCAAATAGCAATGTGGACATAAAAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTCACCAATGCTAAGATTGTTTTGGCTCAATTGGTTCATTGCTTCAATTGGGAGCTTCCTTTGGGCATGTCCCCTGATGAATTGGACATGACTGAGAAATTTGGTCTTACAATGCCAAGAAGTAAGCATTTGCTAGCTGTGCCAACTTATCGCCTAGCAGATGAAATTGGAAAGCAATAA 474 0.4177 MVSPKSLPETLRLYPVAPLVVPRECREDVTIDGYCIKKKSRVIVNAWALGRDSKVWSDNAEEFCPERFSNSNVDIKGFDFRLIPFGSGRRGCPGIHLGLTNAKIVLAQLVHCFNWELPLGMSPDELDMTEKFGLTMPRSKHLLAVPTYRLADEIGKQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00360 157 SUPERFAMILY Cytochrome P450 8 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00360 157 PANTHER CYTOCHROME P450 93A3-LIKE 9 151 - -
Vimu11g00360 157 Pfam Cytochrome P450 7 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00360 157 Gene3D Cytochrome P450 6 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00360 157 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Vimu11g00360 157 PRINTS E-class P450 group I signature 92 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00360 157 PRINTS E-class P450 group I signature 82 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00360 157 PRINTS E-class P450 group I signature 4 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00360 Vimu-Chr11 3818242 3818715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00360 6 150 Monolignol Biosynthesis Gene Families AT4G36220 52.740 1.34e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00360 - - gmx:100798918 271.552