Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00359 ATGAGAGGAGAAGAGTTAGCGTTTGAAGTTGGTGGAAGCATGGTGGTGGTGACTGTGAGAGAGTTCGACCCAAGTAAAGACACAGAGGGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACCTCCACGGTGACCCTATTTGCAGGGTCCGCAATTCACCTACTTTCCTAATGCTGGTAGCCGAAATTGGTCAAGAGACAGTGGGAATGATAAGGGGTTGCATCAAAATCGTTACATGCGGAAAGAAGCTCCAAAGGCACCGAAAGAACACCACCGAACCTGCTTCCAAACAAGTCCCTGTCTACACCAAACTAGCCTACATATTGGGCCTCCGGGTTTCTCCGCACCACAGGAGAATGGGAATAGGGTTGAAACTGGTCCAGAGATTGGAGGAGTGGTTCAGAGAGAACGGAGCAGAGTACGCTTACATGGCAACAGAAAAGGACAACGTGGCATCCGTTAAGCTCTTTACCGACAAATGCGGCTACTCAAAGTTTCGTACCCCGTCCATCCTCGTCAACCCCGTTTTTGCTCACTCACTCACACCCTCCTCCAACGTCACCATCATACAACTTCCTCCAAACGACGCCGAGTTGCTCTACCGCACCAAGTTCGCCACCACCGAGTTCTTCCCCCGCGACGTCGACTCCGTCCTCAACAACCACCTCACTCTCGGCACCTTCCTCGCCGTTCCTCTCGGCTCATACTCCCCCGACACGTGGCCGGGTTCGCCCGGCTTTCTCGCGGACCCACCCCCCTCCTGGGGCCTCCTCAGCGTGTGGAACTGCAAGGACGTGTTCACGCTCCAGGTGATGGGCGCGTCGCGCGTGAAGAAGGTCATCGCAAAGACCACTCGCCTCCTTGACCGCGCCTTCCCCTGGCTGCGCCTCCCCTCCATCCCCAACATCTTCCAGCCCTTTGGGTTTCACTTTTTGTATGGGCTCGGAGGGGAGGGCCCACGGGCCCAGAAGATGGTGAGGGCTCTGTGCGCCTTCGCTCATAACCTCGCCAAGGATAGTGGGTGTCAGGTGGTGGCCACGGAGGTTTCAGGGCAGGAGCCCCTACGCTGCGCCATCCCACACTGGAAGATGCTCTCTTGCGAAGAGGATTTGTGGTGCATCAAGAGACTCGGGGAAGATTACAGCGACGGTGCGGTTGGTGATTGGACCAAATCCCCTCCCGGAATCTCAATTTTTGTTGATCCCAGAGAATTCTAA 1248 0.5569 MRGEELAFEVGGSMVVVTVREFDPSKDTEGVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGQETVGMIRGCIKIVTCGKKLQRHRKNTTEPASKQVPVYTKLAYILGLRVSPHHRRMGIGLKLVQRLEEWFRENGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPSILVNPVFAHSLTPSSNVTIIQLPPNDAELLYRTKFATTEFFPRDVDSVLNNHLTLGTFLAVPLGSYSPDTWPGSPGFLADPPPSWGLLSVWNCKDVFTLQVMGASRVKKVIAKTTRLLDRAFPWLRLPSIPNIFQPFGFHFLYGLGGEGPRAQKMVRALCAFAHNLAKDSGCQVVATEVSGQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGAVGDWTKSPPGISIFVDPREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00359 415 Pfam Acetyltransferase (GNAT) family 63 173 IPR000182 GO:0016747
Vimu11g00359 415 CDD NAT_SF 68 153 - -
Vimu11g00359 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 192 IPR000182 GO:0016747
Vimu11g00359 415 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 415 - -
Vimu11g00359 415 FunFam Probable N-acetyltransferase HLS1-like 26 180 - -
Vimu11g00359 415 Gene3D - 50 179 - -
Vimu11g00359 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 56 175 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00359 Vimu-Chr11 3803279 3804844 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu11g00359 Acetyltransf_1 3.3e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00359 - - gmx:100775317 706.442