Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00356 ATGAAACCTCACCATCATCATTTCACCTTCTTTTTCATTCTATCATCATTCTCTCTACTTCCCACTTTCAGAGCTACCAACACAACGACTCAATTCCGCATTTTCAATGAAACAAGAAGGATTCTCCACCAGCCTCTGTTCCCGGAGCTCTCAGCTCCGCCGCCACTCACCCCACCGCCCCCGGATATTCCTTCTTCTCCCGACATTCCTTTCTTCAATGAGTATCCCGCGGGGCAGCCGCCGCCACTTCAGAACCTGCCTCCGGCGACATCCTCCGGCGCCGTGATCGCGAACCCGACGGCGACACAGCCCACGAAGCCCGCCAAGAAGGTGGCAATTGCGATCTCCGTGGGAATCGTGACCCTAGGAATGTTCTCCGCGTTGGGCTTCTTCTTGTACCGGCACAGAGCAAAACACCCAGTGGAAACTCAGAAACTCGTTTCTCGTAGGCTTCCGGAAGATTCTCCGCGGGCCCCACCACCCTCGAGCTTCCTCTACATTGGAACGGTGGAGCCCGCCAGAACGTCGCTCACCGAACCCAACGGAACGAACATTATCACTTCTCCTTATCGAAAGCTTGATTCTGTTAAGCTTAACTCCGATCACCGTTACCGCCCCAGTCCCGAGTTGCAGCCGCTGCCGCCCCCTCAAAAGCCACCTGACGAAAGCCACTCGCCGCCGGCAGGATTCTCCGACTCATCATCATCGTCCGAGGAGGAAAGCTGTGAGACGGCATTTCACTCGCCGCACGGGTCGTCGCTAAGCCGCGAAGAGAATTGTTTCACGCCCGTCTCCCGCCACAGTTGTCTCGCCGCCGCCATACCAGCGGCGGCTGCTGCTGCTCCGGTTGTTCCTTACTCGAAGAGAACTTCACCGAAATCCAGATTCTCTGCTCCTTCGCCGGATATCAGAAACATGGTCGTACCGCCGGCGAAGCATTCTCCGCCACCGGCACAGGTGCCACTAGCTTCAACCAAATATCAGCAAATAGAAAAAGTAACTAGCATGGGTCCTTCTAGAAGACCAAAATTCTCATCGCCTCCCCCAGCACCGAATTTGACTCATCTTATTAAGACTGCCGCTCCACCTCCTCCACCTCCCCCGCCGCCGCCGCCGCCGCCGTTTCAGAAGGGTTGGTCTCCGTCAACTAGTGCATCTTCGTCCTCTGTGCCAAGGAAGCAGCGAGAGTCTTGGTCTGGAAATGGAGGAGGGTCTTCTGCTAACAGTGTTAGTGTAAGGAAAGGTTGTACCGAGGAAGTTGACAAAAGGCATGCAGGTGATGACGTGGGTGGAGCGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTTTGTGCTACTTCGGACCGTACCACTGTGTGGGATCAGTTAAAATCCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAAATCTACAGCTTCTGCTTTTAAAGACACTGTCAGTAGGAGATCAGTTCTTCCCCCTGTTGAACTCGAAAATAGGGTGTTAGACCCCAAGAAATCCCAAAACATAGCTATACTACTAAGGGCACTTAATGTCACAAGAGATGAGGTCTGCGAAGCTCTTTTGGATGGGAACCCTGAAGGTTTGGGAACTGAGTTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAGGAAATAAAACTTAAAAATTATGATGGTGACCTATCAAGACTTGGTTCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAAAGAATTGAAGCCATGCTATACAGAGCTAATTTCGAAACAGAAGTTAACTACCTTAGGAAGTCCTTTCAGACACTGGAGGCTGCAAGTGAGGAATTAAAGCACAGTAGGCTATTTCTCAAACTTCTTGAAGCCGTTCTAAGGACAGGAAACAGAATGAATGTCGGCACAAACCGTGGTGATGCTAAATCTTTCAAACTAGACACACTTCTAAAACTGGTAGATATAAAGGGCACAGATGGGAAGACAACGCTTCTCCACTTTGTCGTCCAAGAGATCATTAGATCTGAAGGAACAGGTGGTGAATCTGCAAACGAAAATGTTCAAAACCAGACAACTTCCCAATTCAATGAGGACGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCCGGACTAAGTAGAGACCTAGGTAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTGTTGAGAAGCTATGTCTCAAAGCTTGAAAGTGGGCTAGATAAAGTGAGCTTAGTTTTGCAATGCAGAAAGCCTGATATGTATGGAAATTTCTTTAATTCAACTGGGCTATTTCTTAAAGACGCTGAAGCGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTCGTGAAAGAAGTTACAGACTATTTTCATGGTGATGCAGCAAAGGAAGAGGCGCACCCTTTCAGAATTTTTATGATAGTGAGAGACTTTCTAAATAGTTTGGATCAAGTCTGTAAAGAAGTGGGAAGGATGCAAGACAGAACTGTGGTTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCATTACCTGTTCTCAACAGATACCATGCAAGACAAGATACAAGTTCAGACGAGGAAAGTTTATCCCCCTAG 2628 0.4871 MKPHHHHFTFFFILSSFSLLPTFRATNTTTQFRIFNETRRILHQPLFPELSAPPPLTPPPPDIPSSPDIPFFNEYPAGQPPPLQNLPPATSSGAVIANPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRAKHPVETQKLVSRRLPEDSPRAPPPSSFLYIGTVEPARTSLTEPNGTNIITSPYRKLDSVKLNSDHRYRPSPELQPLPPPQKPPDESHSPPAGFSDSSSSSEEESCETAFHSPHGSSLSREENCFTPVSRHSCLAAAIPAAAAAAPVVPYSKRTSPKSRFSAPSPDIRNMVVPPAKHSPPPAQVPLASTKYQQIEKVTSMGPSRRPKFSSPPPAPNLTHLIKTAAPPPPPPPPPPPPPFQKGWSPSTSASSSSVPRKQRESWSGNGGGSSANSVSVRKGCTEEVDKRHAGDDVGGAKPKLKALHWDKVCATSDRTTVWDQLKSSSFQLNEDMMETLFGCKSTASAFKDTVSRRSVLPPVELENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKHSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQNQTTSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLRSYVSKLESGLDKVSLVLQCRKPDMYGNFFNSTGLFLKDAEAEIVRIKADERKALFLVKEVTDYFHGDAAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRTVVGSARSFRIAASASLPVLNRYHARQDTSSDEESLSP 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00356 875 MobiDBLite consensus disorder prediction 208 223 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 200 257 - -
Vimu11g00356 875 PANTHER FORMIN-RELATED 11 869 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vimu11g00356 875 MobiDBLite consensus disorder prediction 415 431 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 280 322 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 334 431 - -
Vimu11g00356 875 ProSiteProfiles Formin homology-2 (FH2) domain profile. 426 850 IPR015425 -
Vimu11g00356 875 Gene3D Formin, FH2 domain 429 836 IPR042201 -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 358 378 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 227 257 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 48 68 - -
Vimu11g00356 875 Pfam Formin Homology 2 Domain 433 824 IPR015425 -
Vimu11g00356 875 SMART it6_source 426 839 IPR015425 -
Vimu11g00356 875 SUPERFAMILY Formin homology 2 domain (FH2 domain) 364 837 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 147 166 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 48 67 - -
Vimu11g00356 875 MobiDBLite consensus disorder prediction 379 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00356 Vimu-Chr11 3759602 3763244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00356 416 865 FH2 protein (formin) Gene Family AT5G67470 70.870 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00356 - - gmx:100776403 1295.41