Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00350 ATGGAAGCAGAGTATGGATCCCTTTCGGTCTCACCCACCATCCCCACAAAACAGGGGAAGAGAAAAGAGAAGAAGGAAAAAGCAGAACAGGAAAAGCAAGATGAAAGAAAGGCCATGAGTTTCAGCCGAGGATTGAGAGGTAAACAGTGGATACTTGTAAAACCATCCACACCAAAGAGGTATGGAGAAGACAAAGCAAGGCATGCCACCCTAGAATTTGAAGAAGTGGAACATTTGTATCGGCTAGTAAGTTTTCAACAGCAACAACACCATCAACCACAACCCGATCCATCCCTCAACTCCACCACCAGCAGAACTTCTAGCAGTTCCAGATCCTCCAGACAAAACTACTACCATTACTCCCACCAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTGTCCTCGTCTTCTTCCAGACACTACTACCCATACCACAACGTATCCACCACCACCACCACAGCCAACACCTTCAGCACCACCGCCAACACCGATTACTCCTACTCCTTCTCCCCCACCCCTCCACTCCCCGACTTCAACTTCCAATTCTCCCCCAACTGGTCCCACAACCTTCTCCTCCAAACCGCACGCGCCTTCGCCGACAACAATAGCACGCGCCTCCACCACCTCCTCTGGATGCTCAACGAACTCAGCTCCCCATACGGCGACACCGATCAAAAGCTCGCCGCGTATTTCCTCCAAGCCCTGTTCAGCCGCGTCACGGATGCGGGAGACCGAACCTACCGAACCTTGGCCTCCGCATCGGAGAAAACATGCTCCTTCGAGTCAACGAGGAAGACGGTGTTGAAATTCCAAGAAGTCAGCCCCTGGACAACTTTCGGACACGTGGCGTCCAACGGCGCCATCTTAGAAGCCTTAGAAGGAAACCCCAAATTGCACATACTTGACATCAGCAACACCTATTGCACTCAATGGCCAACCCTTCTGGAGGCATTGGCAACACGAACAGACGAAACTCCGCACCTCAGGTTAACCACCGTCGTCACCGGGAGAACCGGTAACTCCGTGCAGCGCGTCATGAAGGAAATCGGAACAAGAATGGAGAAGTTCGCGCGACTCATGGGCGTTCCGTTCAAGTTCAACGTCGTTCATCACGCCGGCGATCTCTCCAACCTCAATTTCTCTCAACTCAACCTCAAAGACGACGAAGCCCTGGCCATCAACTGCGTGAACGCGCTACATTCGGTTTCCCCGGCGGGGAACGGCCGCGACGCGTTTATATCGTCGCTGCAAGGGTTGCAGCCGAGGATCGTGACGGTGGTGGAGGAGGAGGCGGATTTGGACGTGGGAATCGAGGGCTACGAGTTCGTGAGAGGTTTCGAGGAGTGTTTAAGGTGGTTTAGGGTTTACTTCGAGGCGCTGGACGAGAGTTTCGCGAAGACGTGCAACGAGAGGCTGATGCTGGAGCGCGCGGCAGGGAGGGCTGTGGTGGACCTGGTGGCGTGTTCGCCAGCGGATTCCCTGGAGCGTCGGGAGACGGCGGCGCGGTGGGGGACGCGGCTGCATGGGGGAGGGCTAAGCGCGGTGCCGTTCAGCGAAGAGGTTTGCGACGACGTTAGGGCGCTGTTGAGGAGGTACAAGGAGGGTTGGTCGATGGTACCGTGCTCCGACACCGGAATATTCCTTTCGTGGAAGGAAACTCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTAA 1707 0.5483 MEAEYGSLSVSPTIPTKQGKRKEKKEKAEQEKQDERKAMSFSRGLRGKQWILVKPSTPKRYGEDKARHATLEFEEVEHLYRLVSFQQQQHHQPQPDPSLNSTTSRTSSSSRSSRQNYYHYSHQEDEECFNFYMDEEDLSSSSSRHYYPYHNVSTTTTTANTFSTTANTDYSYSFSPTPPLPDFNFQFSPNWSHNLLLQTARAFADNNSTRLHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTGRTGNSVQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSNLNFSQLNLKDDEALAINCVNALHSVSPAGNGRDAFISSLQGLQPRIVTVVEEEADLDVGIEGYEFVRGFEECLRWFRVYFEALDESFAKTCNERLMLERAAGRAVVDLVACSPADSLERRETAARWGTRLHGGGLSAVPFSEEVCDDVRALLRRYKEGWSMVPCSDTGIFLSWKETPVVWASAWRP 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00350 568 MobiDBLite consensus disorder prediction 85 117 - -
Vimu11g00350 568 MobiDBLite consensus disorder prediction 17 42 - -
Vimu11g00350 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 557 IPR005202 -
Vimu11g00350 568 ProSiteProfiles GRAS family profile. 183 567 IPR005202 -
Vimu11g00350 568 MobiDBLite consensus disorder prediction 1 43 - -
Vimu11g00350 568 Pfam GRAS domain family 194 567 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00350 Vimu-Chr11 3710370 3713929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00350 115 568 GRAS Transcription Factor Family AT4G37650 60.081 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu11g00350 GRAS 5.7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00350 - - gmx:100778524 823.157