Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00282 ATGTCCTTATCATTCGTCCAAGCAAAAGCTTATAAGAGGAAGTATATAGACAAAACGCTGTGTGTTTGGTTGGCCAGACGAAGCTCTGTAAGCAAAGAGCTTATGCATCTATTTGACCAGATGAAAACATTTGTGCCTGGTTTACAGAATATTTTAGATCAAGAGACAATAAAACACTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCGTCAGCACGAACCTTTTTGAAGGAGTGTTTGGGTGAAGATGAAGATGCAGTTTCTTCAATTGCTTCTTCTGATACCAGCTATAACTCAACTAATGTAAAGCATGTTAATGTTTTAGTGACCTCTGGATCGTTAATTCCCTCACTTGTGAAATGCCTGCTCTTTCGTCTGGACAGCTTGATAAGCCATGGAAATGTTTATAGTTCATGGGAAGTGGGAAAAATTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCTAATGTTCGCTTTTGTGTATTTGGGGATGGATGGGAAGAATGTGAAGCTGCAGAAATCATGAGATGGCCATTTGTTAAGATTGATCCACGGCCAGGAAAACTTCACAGGTTCCCTGGTCTTACTTTGACAACAGTTAGCCACTACTTTTCTGTGGTGTATGGAAGGCCAAACAGTGAGAATGAAGATGGTTGA 681 0.4023 MSLSFVQAKAYKRKYIDKTLCVWLARRSSVSKELMHLFDQMKTFVPGLQNILDQETIKHWDELYDKTDEYTDRWLSSARTFLKECLGEDEDAVSSIASSDTSYNSTNVKHVNVLVTSGSLIPSLVKCLLFRLDSLISHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCVFGDGWEECEAAEIMRWPFVKIDPRPGKLHRFPGLTLTTVSHYFSVVYGRPNSENEDG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00282 226 PANTHER EYES ABSENT 43 212 IPR028472 GO:0004725
Vimu11g00282 226 NCBIfam EYA conserved domain 46 208 IPR006545 GO:0007275
Vimu11g00282 226 Gene3D - 17 200 IPR038102 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00282 47 223 Protein tyrosine phosphatase (PTP) family AT2G35320 58.101 1.06e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00282 - - gmx:100799315 340.502