Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00164 ATGTCCTCTCTTGGTATCAGTTTTGATTTGATTTTGCAGAGAGGAAAAGTTACGACAATGGTGAATGGAGGGTTGGTGGAAGATGTTGCGGTGATTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGGAAACGCTTTGTTGCTCAGTTATCTTATGTCTTTGGGCCTCGAATCTCTTACCATTGTCACTTTTACTTCCTTTGCTACGTTCCTTATTCTCTTACCCTTTGCCTTCTATTATGAAAGGTCTAGATGGCCTACCAAAGTTGGTTTCAAGTTGCTTACACAGCTTTTCTTGCTTGCACTTGGAGGGGTAACAATGTTCCAGTCTCTATTCCTAAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACAGCCATGCCAAATCTTGCACCAGGGCTCATCTTCATTATGGCATGGATTTTTCGGTTGGAAAAAGTAAAGTTAAGCTGCACATATAGTAGAGTAAAAATAGTTGGCACGTTGCTTTGTGTCTTAGGAGCTCTCACACTGAGCATAATGCAAAGCATATCTGCACCTCCTAAGTCCAATAAAGTGGGAACAATTCAATCACCATCTCCACCAACACATGTAACATTTGACAGACACAAGCTAATCGGTTGTCTATATCTTTTGGTCGCAATCCTCATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTAGGAGATTTTCCTGCACCGATGTCGTTGTGTTCAATAACTTGCTTTTTTGGGACATTCATGACTGTCGCAGTTCAATTAATTGAAGATCACGAATTCAAAACTGGTTGGCCTATTGTGAGTGTCGGAGACATGATTGGATATTCTCTTCTGAAAAGAGGGCCAGTGTTGGTGTCCATGTTCAGCCCTATTGGCACAGTCTGCTCAGTCATTTTCTCAGTTGTTACTCTAGGACACACCACCAACATTGGAAGCTTGGCAGGTATGTTCCTGATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGTTGCTTTGATAGTGAATATGACGCAGAGAAGCCTCTTTTAAGTTAA 1053 0.4236 MSSLGISFDLILQRGKVTTMVNGGLVEDVAVIGGLIGVQFVYAGNALLLSYLMSLGLESLTIVTFTSFATFLILLPFAFYYERSRWPTKVGFKLLTQLFLLALGGVTMFQSLFLKGINLTSPAMGTAMPNLAPGLIFIMAWIFRLEKVKLSCTYSRVKIVGTLLCVLGALTLSIMQSISAPPKSNKVGTIQSPSPPTHVTFDRHKLIGCLYLLVAILILSSNIVLQAFTLGDFPAPMSLCSITCFFGTFMTVAVQLIEDHEFKTGWPIVSVGDMIGYSLLKRGPVLVSMFSPIGTVCSVIFSVVTLGHTTNIGSLAGMFLMFTGLYFVLWAKGKEGCFDSEYDAEKPLLS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00164 350 PANTHER WAT1-RELATED PROTEIN 33 336 IPR030184 GO:0016020|GO:0022857
Vimu11g00164 350 Pfam EamA-like transporter family 36 173 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00164 Vimu-Chr11 1432342 1434991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00164 25 341 Nodulin-like Gene Family AT5G47470 52.836 3.86e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00164 - - gmx:100809182 547.354