Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00051 ATGGAGTGTCTCTATGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGAGCACTAAATCAATTACGTTATCCTTGTTGCTTTAAAAATTTCGTCAAAAAGCTTGAAGAAGAAGAGAAATATTTGATTATAACGAAAGATAGTGTCCAAAAATTTGTTACACATAACAAGAAACAAGCGAGAAAGCCCAGTGAAATTGTGGACAAGTGGCTGGAAGATGCTATCAATGATGTACACAATGTCAATCAGTTGCTGGAAGAGGCAAGAACACAAAAACATTCTTGCTTTGGGCACTGTCCAAATTGGATTTGGCGATACCATGTTGGAAAAAAGTTAGCAAATAAAACTATGGACCTCGAAAAGTTCATTGAAGAGGGTAGAAAATATGTGCCACTTGACCGCATCGCTACGCTTCCTTCAAACACCCTTGATATGCTTTCAGAAAAATGCATAAATTTTGATAGTAGACAATCTGCATACGAGCAACTACTGGATGCAGTGAAAAATAATGATGTTTCCATGATTGGGTTGTATGGAATGGGAGGTTGTGGTAAGACCACATTAGCAATGGAAGTTAGGAAATTAGTAGAAGCAGAACATCTTTTTGAAAAGGTTCTTTTTGTAGCCGTTTCTAGTACCGTGGAAGTTCGGAGGATTCAAGAAAAGGTAGCAAGTTCACTGCAATTTGAATTTCCAGAAACAGAAGAAATGCAGAGAGCCCAAAGATTGTGCTCAAGATTAACTCAAGAGAAAAATATTTTTATAATTCTAGATGATGTGTGGGAAAAGCTTGACTTGGGTCGTATTGGGATTCCTCCTTCTAAACACCATAAAGGCTGCAAGATTCTCATTACGACTAGATCAGAATCAGTTTGTAACTCAATGGATTGTCAAAGAAAGATTTACTTGCCAATTTTAACGGATGAAGAAGCATGGACTCTTTTCCAAAATAAAGCACTTATATCAGAAGCCACCTCTAATACCTTAAAGGAAATGGGAAGATTAATTTGCAATGAATGTAAAGGATTGCCGGTTGCCATTGCAGCTGTTGCTTGTAGTTTGAAGGGAAAAGCTGAGACGGTATGGAGTGTTGCATTAAATAAATTCAGACGTTCCAACCCAATAAATATTGAAAGAGGTTTGATTGATCCCTACAAGTGTCTACAACTGAGCTATGATAATTTGGATGATATAGAAGCTAAATCACTTTTCCTGTTGTGCTCTGTGTTTCCTGAAGATTCTGAAATTCCAGTTGAAATTTTAACAAGATGTGCAATAGGATTAGGTGTAGTTGGAGAAGTTGACTCATCTGAAGAGGCAAGGAGTGAAGTGATTGCAGCTAAAATTAAGCTTGTTAGTTGTTGTTTATTGTTGGATGCAGATGATGAATGGGTCAAAATGCATGACATAGTTCGTGATGTGGCCCACATAATAGCAAAAAATGAGAATAAGATGATAAAATGTGAACTGGAGAAAGATGTTAGAGTGGAACAAAATTCTGTAAGATATCTATGGTGTGCGAAAATTCCAAATGATTTGGATTGCTCCAATCTTGAGTTTTTATTCTTACAGACAAAGATGAAAGAATTTGATGGGATTTTCAAAAGAATGGGAATACTCAAAGTTTTGATTCTTGTCAACGATGGGTATAGAAAAACACGATTGTCAAAAATATCTTTCAAAACATTAACAAATCTTCGTTATCTATTCATTCAGAATTATGAATTGAGCGACTTCTCATTTTTAGGCGGTATGAAGAATCTTCAAAGTCTCTCGTTATGTTATTGTTTACTACCTCCTTTTCCTGAATTACAAACCGATTTTGCAATTACACTAAAATTGTTAGAGTTGAGAGGATGTGATATTGAAGTGAAGAATTTTGAAGTGATGAAGAGAATCCCGCTTTTGGAAGAGTTGTACATTATTGATATTCAAGGAAAATGGTATGCTAACAGTAAAGACAATATTGAATTCTTTAAGACTTTTAGCATTCCCGAAACACTGCAAAGGTATGGAATTGTATTAGGGTCTCGTTACTTTGATCATTATAGTAATGGAGATATTTACATTGATGGCAGAACTTTATTACTTAACCATTTTGACATATCAAATGAGGTAATAAAGGGTTTGGCAAAAACAGCAAAGGATCTATTTGTAGGAAATGTTCATGGAGGTGCAAAAAATATCATCCCTGATATATTTCAAATTGAAGGAGGAGGTTTGAATGAGTTGAAGAAGTTAGATATATGTAATTGTGAAGAGTTAGAATGTTTGATTGACACTAGTAATCACTCGAGTGAGGTGGTAACTCTCTTCTCCAAGTTGCATACGTTGAAAATCAATAGCATGGAAAATCTAAAAGTTATATGGCATTGTTTTCTTCCTGCCAATGGACCTTTTGAGAACTTAGAGAAGCTGTATTTAAGTGATTGTCCACGGTTGACATCTCTCTTCACGTATGTGGTTGCTCGAAGTTTGGTAAAATTGAAAATATTAAAAATATCTAGATGTGATGAACTGAAGCATATATTGACATATGATGAGAAAAGTGAAGATGAATTCACCAGTGGGCATCCTGTACAAATCTTCCATAATCTTCAGGAATTAGAGATAGATAGAGGCTTAACTCAATTGAAAGTTCTCGAGATAAAAGAATGTGACAAGCTAGAACAAATAATTGGAGATATTGTTCCATTAACAGCGCAGGATAGAAAAGAAGAACTTGATGAAATCGTTGAGGAAGGAACTCTATCCAGCCTTGCAAGCCTTAAGATAAAACGTTGTGGGAAGTTGGGCTCAATATTTACAGCATCTATAGCTAAGACCTTGACTTCTTTGGAAGAATTGTTCATAGAAGACTGCGAAAGTTTGAAGGATATAGTAACTCACGAAAGGGTCAATAGAAATCAGGAGGAAAGCATTGTTGAGGATGAGCATGATTGTCAGAGTGATATTTCAATCTTCCAAAGTTTGAAAAAGCTGCATATCAGTAATTGTGACTTATTGAAGGGTATATTCCCTGTTTCTTTTGTTGGAGAATTGAATGATATAACAAATAAAGAGGCTGCTCATTTGAAAGACTTCTCTAGTCGAAATAATACTCAAATTGAGCTTCCTGATTTACAAGTACTTGAACTTCATCATATTCGGAACACAACCATTGTTGGTAGTTATGATGTGATATGTCCATCTTTAAGAACACTATCATTGGATATTGGGAGATATGTTGGGTTTTTCAACGTAAATTGTTCGACAGATGCTTCAGAAGCTACAAAAACGGATTCTATTGCAATCAAGATATCGAACTCAGATTTTGTTCCCCCGGTTCAAAGTGTTGAATGTCTTTCAGAACAACCACATGGTTTGAACTTGATTATGATACACAATATCCGAGAGATTGAATTGAATGGCTTTGATAAGGCAAGGTACCTTTTTAAACTGTCCATTGCTTCATCATTGATGATGTTGGAAATTTTGAGAATTAAGGAATGTGGTGGACTTGAGTACATTATAGACACTGATGATATCGATGAATATGGAAAAGAGAATATGAAAGCTATCTTTCCTAACTTAAAAGAGCTCTTTGTGGATGACTGTTTCAAATTGAAATATATGTTTGGGCAATATGACGTAGCTAATAAGGAATATAAGGAGATTCGTATTCAATTCTCAGCATTGGAAATACTCTATCTTCGTGATCTACCAAAGTTTGTTAGCATTTGTTCTAACAACACTGTCACTGTGACGTGGCCATCTTTGAAGGAGTTTCAGTGTTACAGATGTTTCTATCCATTTTATGGTTCTGTTGGTTGTTTGACGATTCCTACAAATTCAAGAGAGCCTATTATCACAAGTACTAAGGATCCGAAAGGGATTCAGAACCCTCTCCTCACTTTGCAAACTCTAAACATAAAGAATTCTGATGCAGAACGTATTTTTTGCCTTAATGAAGATGAAATGATTGGCCAACAAGTGAGTTTAAGGTTAGAGAACATGGAGTTGTATAATCTACCTCAAATGACTTATATTTGGGTAGGTCCCAACAATTCACTTACTTTCCAACATCTTACCACATTAACAATAAGCGAATGTGAAAAGTTGGAAGTAATCTTTCCAAAGTCTGTTGTAAGATGCTTACCAGAGTTGAAGAAAGTAACCATAAGAGAGTGCATGGAATTTAAGCAAATCATGGAAGAAGACGGGTCTGAAGTAGAGGAGATTATTGGATCTGATAAAAAAGCTTCAAACAATTATTTTGCCTTCCCAAATCTTGAAAAACTAGAAATAATTGCATGTGACTCATTGGAAGTAGTCTTTCCAAAGTCTGTTTTAAGATGCTTACCAAAGTTGAAGCTTTTGAAGATAAGCAAATGCAAAGAATTAAGACAAATCATTGAAGGGGATAAAAATTTGTCTAATATTCTTTCTCCTCAACCATGCTTCCCAAAACTAGAAGCATTGTATGTTGATGATTGTCACAAGTTGAAAAGATTATTCTCTGGATCTGCTTCTAATGACCTTCCCAATCTTCATCTTCTGGCCATAAATGGAGCCAATGAACTAGAAGAGCTTGTTGGATGTAAACAGGGAAAGATTAAAGTTGAGCTTCCAAGACTCAAACTTTTAATATTTATGCATCTTTCAAACTTCGGTCAAGAGATTGAATTGCATAATTTAAAGAATTGCATTGTCTACAAATGTCCCAAACTTTCTTTGACTTCAACAACTACTCTTCTGGAGCTCTGGGAAGATTTTCCTTATGAAGGTAAATACTATATATAG 4785 0.3528 MECLYGFASSVSRDLVCGALNQLRYPCCFKNFVKKLEEEEKYLIITKDSVQKFVTHNKKQARKPSEIVDKWLEDAINDVHNVNQLLEEARTQKHSCFGHCPNWIWRYHVGKKLANKTMDLEKFIEEGRKYVPLDRIATLPSNTLDMLSEKCINFDSRQSAYEQLLDAVKNNDVSMIGLYGMGGCGKTTLAMEVRKLVEAEHLFEKVLFVAVSSTVEVRRIQEKVASSLQFEFPETEEMQRAQRLCSRLTQEKNIFIILDDVWEKLDLGRIGIPPSKHHKGCKILITTRSESVCNSMDCQRKIYLPILTDEEAWTLFQNKALISEATSNTLKEMGRLICNECKGLPVAIAAVACSLKGKAETVWSVALNKFRRSNPINIERGLIDPYKCLQLSYDNLDDIEAKSLFLLCSVFPEDSEIPVEILTRCAIGLGVVGEVDSSEEARSEVIAAKIKLVSCCLLLDADDEWVKMHDIVRDVAHIIAKNENKMIKCELEKDVRVEQNSVRYLWCAKIPNDLDCSNLEFLFLQTKMKEFDGIFKRMGILKVLILVNDGYRKTRLSKISFKTLTNLRYLFIQNYELSDFSFLGGMKNLQSLSLCYCLLPPFPELQTDFAITLKLLELRGCDIEVKNFEVMKRIPLLEELYIIDIQGKWYANSKDNIEFFKTFSIPETLQRYGIVLGSRYFDHYSNGDIYIDGRTLLLNHFDISNEVIKGLAKTAKDLFVGNVHGGAKNIIPDIFQIEGGGLNELKKLDICNCEELECLIDTSNHSSEVVTLFSKLHTLKINSMENLKVIWHCFLPANGPFENLEKLYLSDCPRLTSLFTYVVARSLVKLKILKISRCDELKHILTYDEKSEDEFTSGHPVQIFHNLQELEIDRGLTQLKVLEIKECDKLEQIIGDIVPLTAQDRKEELDEIVEEGTLSSLASLKIKRCGKLGSIFTASIAKTLTSLEELFIEDCESLKDIVTHERVNRNQEESIVEDEHDCQSDISIFQSLKKLHISNCDLLKGIFPVSFVGELNDITNKEAAHLKDFSSRNNTQIELPDLQVLELHHIRNTTIVGSYDVICPSLRTLSLDIGRYVGFFNVNCSTDASEATKTDSIAIKISNSDFVPPVQSVECLSEQPHGLNLIMIHNIREIELNGFDKARYLFKLSIASSLMMLEILRIKECGGLEYIIDTDDIDEYGKENMKAIFPNLKELFVDDCFKLKYMFGQYDVANKEYKEIRIQFSALEILYLRDLPKFVSICSNNTVTVTWPSLKEFQCYRCFYPFYGSVGCLTIPTNSREPIITSTKDPKGIQNPLLTLQTLNIKNSDAERIFCLNEDEMIGQQVSLRLENMELYNLPQMTYIWVGPNNSLTFQHLTTLTISECEKLEVIFPKSVVRCLPELKKVTIRECMEFKQIMEEDGSEVEEIIGSDKKASNNYFAFPNLEKLEIIACDSLEVVFPKSVLRCLPKLKLLKISKCKELRQIIEGDKNLSNILSPQPCFPKLEALYVDDCHKLKRLFSGSASNDLPNLHLLAINGANELEELVGCKQGKIKVELPRLKLLIFMHLSNFGQEIELHNLKNCIVYKCPKLSLTSTTTLLELWEDFPYEGKYYI 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00051 1594 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 863 1068 - -
Vimu11g00051 1594 Pfam NB-ARC domain 163 394 IPR002182 GO:0043531
Vimu11g00051 1594 Gene3D Ribonuclease Inhibitor 1284 1525 IPR032675 -
Vimu11g00051 1594 Gene3D - 307 399 IPR042197 -
Vimu11g00051 1594 Coils Coil 72 92 - -
Vimu11g00051 1594 SUPERFAMILY L domain-like 467 1007 - -
Vimu11g00051 1594 PRINTS Disease resistance protein signature 874 890 - -
Vimu11g00051 1594 PRINTS Disease resistance protein signature 248 262 - -
Vimu11g00051 1594 PRINTS Disease resistance protein signature 341 355 - -
Vimu11g00051 1594 PRINTS Disease resistance protein signature 175 190 - -
Vimu11g00051 1594 Gene3D Ribonuclease Inhibitor 493 668 IPR032675 -
Vimu11g00051 1594 SUPERFAMILY RNI-like 1329 1551 - -
Vimu11g00051 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Vimu11g00051 1594 Gene3D Ribonuclease Inhibitor 697 902 IPR032675 -
Vimu11g00051 1594 Gene3D Ribonuclease Inhibitor 918 1270 IPR032675 -
Vimu11g00051 1594 Gene3D - 141 303 IPR027417 -
Vimu11g00051 1594 FunFam Probable disease resistance protein At1g61300 145 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00051 Vimu-Chr11 476100 481907 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00051 172 577 WRKY Transcription Factor Family AT5G45050 24.208 2.51e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00051 - - vra:106753628 2663.64