Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00038 ATGGAGACAAACTCAACACTGTTCTTCAGTTTCACACTCCTTCTTCTGATCACCTTCATCACCTTTCTGAAAGCTCTCACATCACTTCTCACTCCAAACAAAAGCAAATCAAAGCTTCCACCAGGCCCTAAAGGTCTTCCTCTTGTGGGAAATCTCCTCCAACTGGGTGCCAAGCCCCACCAAACCCTGGCCACCCTGGCCAACATTCATGGTTCAATAATGAGCCTCAAACTGGGCCAAGAGACCACCATCGTGATGTCCTCAGCAGAAGCAGCCAAAGGGGTGCTCCAAATCCATGATCACTTTCTCTCAAACAGAAAGATCCCTGATGCAATGAGAGGTGCCAGCCATGACCACTTCAGCTTGCCCTTCATGCCAGTTTCACAACAGTGGAGGGAGCTGAGGAAGCTGTGCAATGAACTCTTGTTCTCCAACAAGAACTTGGACGCCACTCAGGAACTCAGAAGCAAGAAGGTTCGAGAGCTTTACAGTGACATTCACCGTAGCAGCTTGAAGGGTGAACCTGTGAACATTGGAAGGTTGGCTTTCAAGACGACAATAAATCAGCTGTCAAACACAATCTACTCAGAGGATTTCCTTCAGTCGGCTGAAAAAGCTGGGGAGATGAAGGAGTTGGTGACCAACATCATGAAAGAGGTTGGAAGGCCAAATTTGGCTGATTGTTTCCCAGTGCTGAAGATGATTGACCCTCATGGAATCAGAAGACGCACAGGAAGCTACTTTTTGAAGCTTTTGAACATATTCAAGAACTTGATTCACAAAAGGCTGGAACTGAGAAAGGATGCTGCTGGTTACTGCACCAAAAAGGACATGTTGGATGCCATGCTGAACAATGCTCAACATAAGATGGACACAGTTAAGATTCAACGTTTGTCATTGGATTTGTTTGTGGCAGGAACTGATACAGTGACATCTACGGTAGAATGGGCAATGGCTGAGTTACTTCACAACCCACATGTTATGTCAAAGGCAAAAGAAGAGTTAGAGAGGATTATAGGAAAAGATAACCTTGTGGAAGAGTCAGACATAGCGAAACTCCCTTATTTGCAGGCAATAGTGAAAGAGACTTTCAGGCTGCACCCTGCAGTTCCACTTTTGCTACCTAGAAAAGCTGAAGTGGAATTTGAGATGCATGGATACAACATTCCAAAGGGTGCACAAGTGTTGATTAATGTGTGGGCCATAGGGAGGGACCCTGATTTGTGGGAAAAACCTAGATTGTTTTGGCCTGAGAGATTTTTGGAATCAGAAATAGACTTCAAAGGAAGGAGTTTTGAGCTTACCCCATTTGGTGGTGGGAGAAGAATATGCCCTGGTTTGCCATTGGCCATAAGGTTGGTGTTCTTGATGTTGGGATTGTTCATCAATTCCTTTGATTGGGAGCTTCAGGCTATTCAACCAGAGGATATGAACATGGATGAAAACTTTGGACTCACCTTGGAGAAGGCTCAACCGGGGATTGTTCTTTTATTTGTGATTAAAGAAAGTTAA 1512 0.4478 METNSTLFFSFTLLLLITFITFLKALTSLLTPNKSKSKLPPGPKGLPLVGNLLQLGAKPHQTLATLANIHGSIMSLKLGQETTIVMSSAEAAKGVLQIHDHFLSNRKIPDAMRGASHDHFSLPFMPVSQQWRELRKLCNELLFSNKNLDATQELRSKKVRELYSDIHRSSLKGEPVNIGRLAFKTTINQLSNTIYSEDFLQSAEKAGEMKELVTNIMKEVGRPNLADCFPVLKMIDPHGIRRRTGSYFLKLLNIFKNLIHKRLELRKDAAGYCTKKDMLDAMLNNAQHKMDTVKIQRLSLDLFVAGTDTVTSTVEWAMAELLHNPHVMSKAKEELERIIGKDNLVEESDIAKLPYLQAIVKETFRLHPAVPLLLPRKAEVEFEMHGYNIPKGAQVLINVWAIGRDPDLWEKPRLFWPERFLESEIDFKGRSFELTPFGGGRRICPGLPLAIRLVFLMLGLFINSFDWELQAIQPEDMNMDENFGLTLEKAQPGIVLLFVIKES 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00038 503 CDD CYP76-like 67 500 - -
Vimu11g00038 503 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 FunFam Cytochrome P450 76C4 31 496 - -
Vimu11g00038 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 Gene3D Cytochrome P450 26 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00038 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vimu11g00038 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 492 - -
Vimu11g00038 503 SUPERFAMILY Cytochrome P450 40 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00038 Vimu-Chr11 356439 360081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00038 12 491 Cytochrome P450 AT2G45550 45.325 4.02e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00038 - - lja:Lj2g3v0039250.1 629.787