Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00026 ATGGTTATGACGCATGTCCCAACCCCAACCTGCCACTCTATAAAACCTTTTCCTCCCAACCGACACCCCTTCACACAACTCTTTTCAGTTTCACAAAAACTATACATATCACTATCTTCTCTTCTTCACCTATCTATCTATCTATCTATGCCTCCAAACTCTTTCTCTCTCTCCAAAATCACTTCCTCCACCATGCAACCTCTCACCAACTTTCTCCAAGATTACACCTTCCTCCTTTTCTCCTCCTCCTTTTTCCTCCTCCTCCTCTTACCCTTCCTCCAATGGTGGCACCACCATAACCACAAAAAACTTCCCCCTGGCTCCATGGGTTGGCCCTACCTTGGAGAAACCCTCAAACTCTACACTCAAAATCCAAATTCCTTCTTCTCTAACCGCCAAAATAGGTATGGTGATATATTCAAGACAAACATACTGGGGTGTCCATGTGTGATGATATCGAGCCCTGAGGCAGCTAGGACAGTCCTTGTGACTCAGGCACATCTCTTCAAACCAACATACCCTCCCAGCAAAGAGAGGCTTATAGGACCAGAAGCTGTCTTCTTTCAGCAAGGTGCCTATCATTCCATGCTCAAGAAGCTCGTTCAGGCCTCCTTTTTGCCCTCCACAATCAAACACTCTGTCTCTCATGTTGAGCAAATTGTTATCAAAATGGTTCCTTCTTGGACTAACAAAACCATCAACACCTTGCAAGAGATGAAAAAGTATGCTTTTGAAGTAGCAGCAATCTCAGCCTTTGGTGAGATAAAGGAGTTGGAAATGGAAGAAATCAGAGAATTGTATCGTTGCTTGGAGAAAGGCTACAATTCTTATCCATTACATCTTCCTGGAACTTCCTATTGGAAAGCAATGAAGGCAAGGAAGCATTTGAATGAGAGCATAAGAAGGATAATTGAGAGAAGAAAAGTGGAGAGTTCAAAGTATGGAGGAGGACTACTGGGAGTTCTATTGCAGGCTAGATCTTCATCATCGAGATCAAGATCAACATGTTCAAGATCTTCATCATGTGGTGAGGAGAAGAAGGTGTTCATGGAACTGAGTGATTCTCAAGTAGCAGATAATCTGATTGGTGTGCTATTTGCTGCACATGACACCACAGCAAGTGCCCTAACATGGGTCCTCAAGTACCTTCATGACAACTCCAATCTCTTGGAAGCTGTGACGAGAGAACAAGAAGGAATAAGAAGCAAACTAGCTATGGAAAATCGTGGACTTTCGTGGGATGATACCAGACAAATGCCATTCACAAATCGGGTAATTCAAGAAACATTGAGAAGTGCAAGCATTTTGTCATTCACATTCAGAGAAGCAGTGACAGATGTTGAGTTGGAAGGTTACACAATTCCGAAAGGTTGGAAGGTCCTTCCTCTCTTCAGAAGCATTCATCATTCTGCTCACTTCTTCCCTCACCCAGAGAAGTTCGACCCTTCAAGATTCGAGGTACCACCGAGACCAAACACATACATGCCTTTTGGAAATGGTGTCCACTCTTGTCCAGGGAGTGAGCTGGCCAAGCTAGAACTTCTTGTCCTTCTCCATCATCTCACACTTTCTTACAGGTGGGAAGTTGTGGGGAAAGAGGATGGAATACAATACGGTCCATTTCCTGTGCCAAAACATGGATTACCAGTGAAGATAATCCCAAGGAGAAAGATATTTACGTGA 1683 0.4373 MVMTHVPTPTCHSIKPFPPNRHPFTQLFSVSQKLYISLSSLLHLSIYLSMPPNSFSLSKITSSTMQPLTNFLQDYTFLLFSSSFFLLLLLPFLQWWHHHNHKKLPPGSMGWPYLGETLKLYTQNPNSFFSNRQNRYGDIFKTNILGCPCVMISSPEAARTVLVTQAHLFKPTYPPSKERLIGPEAVFFQQGAYHSMLKKLVQASFLPSTIKHSVSHVEQIVIKMVPSWTNKTINTLQEMKKYAFEVAAISAFGEIKELEMEEIRELYRCLEKGYNSYPLHLPGTSYWKAMKARKHLNESIRRIIERRKVESSKYGGGLLGVLLQARSSSSRSRSTCSRSSSCGEEKKVFMELSDSQVADNLIGVLFAAHDTTASALTWVLKYLHDNSNLLEAVTREQEGIRSKLAMENRGLSWDDTRQMPFTNRVIQETLRSASILSFTFREAVTDVELEGYTIPKGWKVLPLFRSIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLELLVLLHHLTLSYRWEVVGKEDGIQYGPFPVPKHGLPVKIIPRRKIFT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00026 560 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS P450 superfamily signature 367 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PANTHER CYTOCHROME P450 26 102 544 - -
Vimu11g00026 560 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 356 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 423 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 463 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 133 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 PRINTS E-class P450 group I signature 376 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 FunFam Abscisic acid 8 94 554 - -
Vimu11g00026 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Vimu11g00026 560 SUPERFAMILY Cytochrome P450 95 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 Pfam Cytochrome P450 105 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00026 560 Gene3D Cytochrome P450 96 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00026 Vimu-Chr11 241272 248676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00026 103 550 Cytochrome P450 AT3G19270 57.016 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00026 K09843 - gmx:100782541 824.313