Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00008 ATGGATATTGACACTCCACGTTTCCTTCAAATGATTTCAACTTTGGTTCTCATTCTAGTTTCTGTTCCATCACTGGCCTCAGCGTCTCTCAAAGTAGGTTTCTACACTTCCACATGTTCATCTGCCGAGGAAATAGTAAGAAATGCTGTAAACAAAGGCATTTCTGAAAATCCTGGCATAGCTCCTGGTCTCATTAGGATGCATTTCCACGACTGCTTTGTTAGGGGCTGTGAGGGTTCTGTGTTGCTAGCATCTGCCCCGGGTAACCCAATAGCGGAAAGAGACCATCCTGCCAACAACCCAAGCTTACGTGGGTTCGAGGTGATCGAGGAGGCCAAGACACAGTTGGAGGCTGCATGTCCTGGAACGGTGTCGTGTGCAGACATATTGGCTTTCGCAGCACGAGACAGTGCTCTGAAAGTTGGCGGCATAAACTACGACGTTCCATCAGGACGCAGAGACGGTCGTGTCTCTATCGCCGACGAAGTGGCACAGAATCTCCCTGCACCAACCTCGAGTGCCGATGAACTCGTGAGTAGATTTGCACAGAAGGGTTTGAGTGCAGACGAAATGGTGACACTTTCAGGAGCTCATTCGATTGGTGTGTCGCACTGTTCCGCCTTCTCGAAGCGCTTGTACTCTTTCAATGACACGTTCACGCAAGATCCCTCCATGGACTCTTCCTACGCCGAAACATTGAAGACCAAGTGCCCTGCGCCACCTGCCACCTCAGACCCAACACTCTCTCTTGACCCTTCCACTCCGGTTCGTTTGGACAGCAAATACTACGAGGGATTGATCAACCACCGTGGCCTGTTGACGTCGGATCAGACGCTGTTCACCACCCAGTCCACAAGGGACATTGTCGTGAACAATGCAAACAACGGTGCAAGCTGGTCTGAGAAGTTTGCCAAGGCAATGGTGCACATGGGTTCCATAGAAGTGCTCACGGGCTCCAGTGGCGAGATCAGGAAGCATTGCAGCTTTGAAGGAGAGGTGGCAAAGGAAGAGTGGATAATTAAACGTAGGTGCGTGGAGATAACAAAAGAAGAAACGGAGAGAAAGTTGAAGTGTGTAACGAAGAAGTACGGAAAGTGA 1098 0.5018 MDIDTPRFLQMISTLVLILVSVPSLASASLKVGFYTSTCSSAEEIVRNAVNKGISENPGIAPGLIRMHFHDCFVRGCEGSVLLASAPGNPIAERDHPANNPSLRGFEVIEEAKTQLEAACPGTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIADEVAQNLPAPTSSADELVSRFAQKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTFTQDPSMDSSYAETLKTKCPAPPATSDPTLSLDPSTPVRLDSKYYEGLINHRGLLTSDQTLFTTQSTRDIVVNNANNGASWSEKFAKAMVHMGSIEVLTGSSGEIRKHCSFEGEVAKEEWIIKRRCVEITKEETERKLKCVTKKYGK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00008 365 Gene3D Peroxidase, domain 2 168 310 - -
Vimu11g00008 365 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vimu11g00008 365 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 Gene3D - 33 329 - -
Vimu11g00008 365 Pfam Peroxidase 46 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 FunFam Peroxidase 168 310 - -
Vimu11g00008 365 PANTHER PEROXIDASE 25-RELATED 19 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 ProSiteProfiles Plant heme peroxidase family profile. 29 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00008 365 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vimu11g00008 365 FunFam Peroxidase 33 177 - -
Vimu11g00008 365 CDD secretory_peroxidase 30 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00008 Vimu-Chr11 123996 125479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00008 15 329 Peroxidase AT4G11290 44.025 3.41e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00008 K00430 - gmx:100815350 536.569