Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00007 ATGGATAATACTCCATGGTTGCTTCAAATGGTTTCTGCTTTGGTTCTGATTTCATTGGCCTCAGCATCTCTGGAAGTTGGTTTCTATAGGTCCACATGCCCATCTGCTGAGGCAATAGTGAAAAGCACTGTAGAGAAAGCAATTTCTGCCAACCCAGGCATAGCTGCTGGTATCATCAGAATGCATTTCCATGATTGTTTTGTTAGGGGGTGTGATGGTTCTGTGTTACTAGCATCTACACCGGGAAACCCACCAGCTGAACGAGACAATTTCATCAACAACCCAAGCTTACGAGGGTTCGAGGTGATTGACGAGGCCAAGACCCAGTTGGAGGCTGCATGCCCTAACACAGTATCATGTGCTGACATTTTGGCCTTTGCAGCACGAGACAGTGCTTCCAAAGTTGGTGGCATAAACTATGATGTTCCATCAGGACGCAGAGATGGTCGTGTCTCTATTGGTGACGAAGTGCCACAGAATCTTCCTGGACCAGGTTTCAGTGCTGATCAGCTCATCGATAACTTTGGACGAAAGGGTTTGTCTGTAGATGAAATGGTCACACTTTCAGGAGCACATTCAATCGGTGTGGCTAATTGTGGTACCTTCTCGAATCGCTTATACACTTTCAGTGACACAGTGAGACAAGATCCCTCACTCGACCCTTCATATGCTGAAACGTTGAAAAACCAGTGTCCTCCACCACCCACTGTGACAGGCACCACAGTTTCTCTGGAACCTTCCACTCCTATTCGTTTGGACAGCAAATACTATGAGGGTTTGATCAACCACCGTGGCTTGTTGACGTCAGATCAGACCTTGTTCGACACTCAATCCACAAAGGCAATAGTTGAAAACAATGCATACAATGGTGCAAGTTGGGCTGAGAAGTTTGCCCAAGCAATGGTGCGCATGGGTTCTATACAAGTGCTTACCGGCTACGATGGTGAGATCAGGAAGCAGTGCAGCTTCGTTAATTAG 978 0.4683 MDNTPWLLQMVSALVLISLASASLEVGFYRSTCPSAEAIVKSTVEKAISANPGIAAGIIRMHFHDCFVRGCDGSVLLASTPGNPPAERDNFINNPSLRGFEVIDEAKTQLEAACPNTVSCADILAFAARDSASKVGGINYDVPSGRRDGRVSIGDEVPQNLPGPGFSADQLIDNFGRKGLSVDEMVTLSGAHSIGVANCGTFSNRLYTFSDTVRQDPSLDPSYAETLKNQCPPPPTVTGTTVSLEPSTPIRLDSKYYEGLINHRGLLTSDQTLFDTQSTKAIVENNAYNGASWAEKFAQAMVRMGSIQVLTGYDGEIRKQCSFVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00007 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vimu11g00007 325 Gene3D - 27 325 - -
Vimu11g00007 325 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 FunFam Peroxidase 162 304 - -
Vimu11g00007 325 FunFam Peroxidase 27 167 - -
Vimu11g00007 325 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Vimu11g00007 325 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vimu11g00007 325 Pfam Peroxidase 40 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 PANTHER PEROXIDASE 25-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00007 325 Gene3D Peroxidase, domain 2 162 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00007 Vimu-Chr11 118910 120007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00007 24 325 Peroxidase AT1G05250 44.918 1.41e-93 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00007 K00430 - gmx:100792351 530.791