Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03728 TGTGATCTGTGTCGCAGAGGCAGAGCATTAGTCACCATGGCAAGCCACGAAGACGACCTCGATCTCCTTCTCTCTCTTCAAGACAGAGTTCCCGAAACTCCTCCCGCTTCTCCCACACCAGGTTACCTTTCCGATGACGAATCGCTCAACCAAAGGGACAAACCTGACATGTCCGTATTCAAAAACGCCGTTCAAGATTGTCTTCCCTACGACCCCCCAAAAGCGCTCAAACCAACTAACAAACCTGTTACTGACGATTCCCAGCTTGAAAAGTTTTCAGGCCTTCGCATTAAGAACCAATTGTTAACTCCTGCGGAGTTGAAGGAACAATTTTCAGACATTCGCTTTGTTCGGTTATCTGTTATCAAGAATTCGTTGATTGGAGATAGTTTCTCTGGAAATTGGGCCACTGTTGGTGTTTTGACCGAGAAGGGGAGTCAGAAAACGAGTTCAACGGGTAAAAGCTTTTCTATATGGAAAATTGGGTGTCTGGATGAATGTACCATTTCTCTTTTCTTGTTCGGAGATGCTTATCAGAGGAACATGCAAGAGCAAGCGGGAACAGTCTTTGCACTGTTTAACTGTGCTGTTCGCAAGGATAATGCGGGCAATGGTTTTTCTTTGAGTATATATTCCACTAGACAAATTGTGAAGATGGGCACCTCTGTTGATTATGGGGTTTGCAAAGGGAAGCGAACAGATGGGATGGCTTGTACGCTGGTCATAAATAAACGTCATGGGACATATTGCAAATATCATAAATCAAAAGCATCAGAGAAATATTCCACGATGCGAAGTGAACTCATGGGAGGAAACTTAAGAACAGCGTTTAGGCCTAAGTCTAGGGATTACCTCAAATCAGAAGGAATTTACTTAGTTGACCCCCTTGCTGATAAAACAAACTTGAAGAATTCTCGGCCAGTGAAACTATTGTCCACGGATGGTCTCAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAACTCCTCATTCTCAAGGGATCAGGTTTCTTTCTCAGCTTGCAGCCATGACGAATCCGAAAGCGAAGAATAAAGGATCAAAGATTCCACATGAACAAAAATGCACGGAGAAGAGGAAATCATCCTTTTCGAATGTAGGATCCTCTTCAGTCGTAGGAAACCGACATTTGGATGGAAAAAGAATAAAATCAGATGACCAGGTTTTGGCTGCTAAAACTCCAAAGCCTACTGAAAAGATGATTGAATTAGACTTTGTAAGCTCGGACGAAGACTTCTAA 1260 0.431 CDLCRRGRALVTMASHEDDLDLLLSLQDRVPETPPASPTPGYLSDDESLNQRDKPDMSVFKNAVQDCLPYDPPKALKPTNKPVTDDSQLEKFSGLRIKNQLLTPAELKEQFSDIRFVRLSVIKNSLIGDSFSGNWATVGVLTEKGSQKTSSTGKSFSIWKIGCLDECTISLFLFGDAYQRNMQEQAGTVFALFNCAVRKDNAGNGFSLSIYSTRQIVKMGTSVDYGVCKGKRTDGMACTLVINKRHGTYCKYHKSKASEKYSTMRSELMGGNLRTAFRPKSRDYLKSEGIYLVDPLADKTNLKNSRPVKLLSTDGLRKALSNAGKVTTTPHSQGIRFLSQLAAMTNPKAKNKGSKIPHEQKCTEKRKSSFSNVGSSSVVGNRHLDGKRIKSDDQVLAAKTPKPTEKMIELDFVSSDEDF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03728 419 MobiDBLite consensus disorder prediction 348 403 - -
Vimu10g03728 419 FunFam DNA replication licensing factor mcm10 81 255 - -
Vimu10g03728 419 Pfam Primase zinc finger 220 265 IPR015408 GO:0005634|GO:0006260
Vimu10g03728 419 PANTHER PROTEIN MCM10 HOMOLOG 46 373 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vimu10g03728 419 Gene3D - 80 254 IPR012340 -
Vimu10g03728 419 MobiDBLite consensus disorder prediction 29 53 - -
Vimu10g03728 419 MobiDBLite consensus disorder prediction 352 366 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03728 29 418 Core DNA Replication Machinery Family AT2G20980 54.912 3.13e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03728 K10736 - gmx:100527758 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03728 10 46155664 46158637 Vimu10g03728 10 46155664 46158637 ECH