Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03722 ATGGGTAAGATTCTTTGGAGGTTACTTTCCTGCACATTCTTCATCATTCTCTTAAGTTTACTGTTTAAAGTAACGGCAGGCTATCATCCTTCCAAAACATTCATCTTAAGAATCGATTCCGAATCCAAACCCTCCGTTTTCCCCACGCACTACCACTGGTACACCGCCCACTTTGTCCACCCAACTCGCCTTCTCCATCTCTACGACACCGTTTTCCACGGTTTCTCTGCCCTCCTCACCCCCCAACAACTTTCTTCTCTTTCCCACCACCCCTCCGTGCTAGCTGTCTTCGAGGACCGCCGCCGCCACCTTCACACCACGCGCTCTCCTCAGTTCGTTGGCCTCAGAAACCACCGCGGTCTGTGGTCCCAAACTGACTACGGATCCGACGTCATCATCGGAGTCTTCGACACCGGAATCTGGCCTGAACGCCGGAGCTTCAGCGATTCCAACCTCGGCCCCATTCCTCACCGCTGGAAAGGGAGTTGCGATACTGGTGTAAGATTTTCTCCTAACAACTGTAACAGAAAGCTGATCGGTGCACGGTTCTTCTCCAAAGGTCATGAGGCAAGTGGCACGTTGTTTAACGACACCGTCGAATTCCTTTCTCCAAGGGACGCTGACGGTCACGGAACCCACACGGCGTCAACCGCCGCGGGCCGCTACGTTTTCGAAGCCAGCATGGCGGGATATGCATCTGGAGTTGCAAAGGGCGTGGCTCCGAAAGCCAGACTTGCAATGTACAAGGTGTGTTGGAAGAATTCTGGCTGCTATGACTCTGACATTCTTGCAGCATTTGACGCTGCCGTAAACGACGGCGTCGACGTCATTTCCATGTCCATCGGCGGCGGCGACGGCATTTCCTCTCCTTACTATCTTGATCCAATTGCGATAGGGTCCTACGGTGCAGTTTCCAGAGGTGTGTTTGTGTCATCCTCGGGTGGAAATGACGGGCCCAGTGGAATGTCGGTGACCAACCTTGCACCCTGGTTGACCACTGTCGCGGCAGGTACCATCGATCGGGATTTTCCGGCGGAGGTTATACTGGGAAACGGACGAAGACTCTCCGGCGTGTCTCTCTACTCCGGAGTTCCGTTGAAGGGGAGAATGTTTCCCTTAATATATCCCGGAAAATCAGGGGTTCTTACGGATTCACTATGCATGGAAAACTCGTTAGACCCAGACCTTGTGAAAGGGAAGATAGTGGTTTGCGACAGAGGAAGTAATCCTAGAGTTGCGAAGGGATTGGAGGTGAAGAAAGCAGGAGGAGTAGGAATGATTCTGGCAAATGGAATATCCAACGGTGAAGGACTTGTTGGAGACGCTCATCTTCTTCCCGCGTGTGCACTTGGTGCTAACTTGGGAGATGAAGTTAAAGCCTACATTTCATCCTCTGAGAACCCAAGGGCCACTATCGAATTCAAAGGAACTGTGGTGGGAATCAAACCGGCACCCGTAGTGGCGTCGTTTTCGGCGAGAGGACCCAACGCGTTGAATTTGGAAATACTTAAACCTGACTTGGCGGCGCCCGGGGTGAACATTCTGGCGGCGTGGACCAATGCGGTTGGGCCGTCAGGGCTTGAGTCAGACACGAGAAGAAGCGAGTTCAACATTTTGTCGGGCACATCGATGGCGTGTCCTCATGTGAGTGGGGCAGCGGCGTTGTTGAAATCCGCGCATCCTGATTGGAGCCCTGCAGCTATAAGGTCTGCAATGATGACAACCGCTACGGTTCTTGACAACACCAACCGTGAAATGGTTGATCAAGCCACTGGGAATGGCTCCACGCCCTACGATTTCGGCGCTGGACATCTCAACCTCGCTCACGCCATCGACCCTGGGTTGATTTTCGACATTACCAACGATGATTACGTCATGTTTTTGTGTGCCATTGGCTACAGGCCCAGGGTGATTCAGGTGATTACCCGATCGCCGCCTAAATGTCCACGGAGGAGGCCGTCACCGGAGAATCTGAACTATCCGTCCTTTGTAGCGGTCCTGCCAGCGTCTTCATCCTCCAGACGGTTGTCGTTGCTGAGCAAGACGTTCTTCAGGACGGTGACGAACGTAGGTGAGCCAAATTCGGTGTATTGGGTGAGGGTAGAGATGGAGGCGGAGGGATTGACGGTGACGGTGAGGCCATCGAGGCTAGTGTTTTCGGAGGCGGTTAAGAAGCGGAGTTTCGTAGTGACGGTGACGGGAGATGCAGGGAAGCTGGTGCTGGGCGAGGCCGGAGCGATCTTCGGGTCGCTTTCGTGGACCGATGGGAAGCACGTTGTTCGGAGCCCCATGGTTGTCACTCAAGCTCAACCGCTTTAA 2319 0.536 MGKILWRLLSCTFFIILLSLLFKVTAGYHPSKTFILRIDSESKPSVFPTHYHWYTAHFVHPTRLLHLYDTVFHGFSALLTPQQLSSLSHHPSVLAVFEDRRRHLHTTRSPQFVGLRNHRGLWSQTDYGSDVIIGVFDTGIWPERRSFSDSNLGPIPHRWKGSCDTGVRFSPNNCNRKLIGARFFSKGHEASGTLFNDTVEFLSPRDADGHGTHTASTAAGRYVFEASMAGYASGVAKGVAPKARLAMYKVCWKNSGCYDSDILAAFDAAVNDGVDVISMSIGGGDGISSPYYLDPIAIGSYGAVSRGVFVSSSGGNDGPSGMSVTNLAPWLTTVAAGTIDRDFPAEVILGNGRRLSGVSLYSGVPLKGRMFPLIYPGKSGVLTDSLCMENSLDPDLVKGKIVVCDRGSNPRVAKGLEVKKAGGVGMILANGISNGEGLVGDAHLLPACALGANLGDEVKAYISSSENPRATIEFKGTVVGIKPAPVVASFSARGPNALNLEILKPDLAAPGVNILAAWTNAVGPSGLESDTRRSEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNTNREMVDQATGNGSTPYDFGAGHLNLAHAIDPGLIFDITNDDYVMFLCAIGYRPRVIQVITRSPPKCPRRRPSPENLNYPSFVAVLPASSSSRRLSLLSKTFFRTVTNVGEPNSVYWVRVEMEAEGLTVTVRPSRLVFSEAVKKRSFVVTVTGDAGKLVLGEAGAIFGSLSWTDGKHVVRSPMVVTQAQPL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03722 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Vimu10g03722 772 SUPERFAMILY Protease propeptides/inhibitors 33 104 - -
Vimu10g03722 772 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vimu10g03722 772 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vimu10g03722 772 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vimu10g03722 772 ProSiteProfiles Serine proteases, subtilase domain profile. 101 611 - -
Vimu10g03722 772 Gene3D Peptidase S8/S53 domain 130 624 IPR036852 GO:0004252|GO:0006508
Vimu10g03722 772 Pfam Peptidase inhibitor I9 47 105 IPR010259 -
Vimu10g03722 772 Pfam Subtilase family 128 594 IPR000209 GO:0006508|GO:0008236
Vimu10g03722 772 CDD PA_subtilisin_like 347 472 - -
Vimu10g03722 772 Pfam Fibronectin type-III domain 657 766 IPR041469 -
Vimu10g03722 772 SUPERFAMILY Subtilisin-like 104 615 IPR036852 GO:0004252|GO:0006508
Vimu10g03722 772 FunFam subtilisin-like protease SBT1.5 340 479 - -
Vimu10g03722 772 Gene3D - 340 479 - -
Vimu10g03722 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 766 IPR045051 -
Vimu10g03722 772 CDD Peptidases_S8_3 103 577 IPR034197 -
Vimu10g03722 772 Pfam PA domain 384 456 IPR003137 -
Vimu10g03722 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vimu10g03722 772 SUPERFAMILY PA domain 397 470 IPR046450 -
Vimu10g03722 772 Gene3D - 628 769 - -
Vimu10g03722 772 FunFam Subtilisin-like protease SBT1.5 130 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03722 Vimu-Chr10 46113856 46116966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03722 10 772 Subtilisin-like Serine Gene Family AT4G34980 70.926 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03722 - - gmx:100792501 1306.2