Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03717 ATGGGCGGTGATTGGAGTTGGAGCAGGAGGAAATGGATTGGGTTGGTGGCGGCGGTGTGGATTCAAGCTATCTCCGGCAACAACTACACTTTCTCAAATTACTCCGACGCTCTGAAATCGCTCATGCATCTCACGCAAGTCCAACTCAACAATCTGTCGGTGGCCAAGGACGTCGGAAAGGCATTTGGGCTTCTTGCTGGGCTTGCTTCTGACAAATTCCCCACTTGGATCATTCTCCTCATCGGCTCCGTCGAAGGTCTCGTCGGTTATGGCGTTCAGTGGCTAGTCGTCAGCCAAAGAATTCAACCCCTTCCCTACTACCAGATGTGCATATTTCTCTGCCTGGGTGGCAACAGCACCACATGGATGAACACGGCGGTTCTCGTCACCTGCATCCGCAACTTCCGCCGCAACAGAGGTCCTGTTTCCGGCATTCTCAAAGGCTATGTCGGATTGAGCACCGCCATATTCACCGACCTCTGTTCCGCTCTCTTCGCGAACGACCCTGCTTCGTTTCTCATCATGCTCGCTCTTATCCCATTCGTCGTTTGCCTCTCCGGAATCTTTTTCCTCCGTGAGATTCCTCCCGCCGCTGTCCAGGATGACGAAGAGTCCACTTATTTCGGGGTCTTCAACGCCGTCGCCGTCGCAGTCGCCGTTTACCTTTTGGCCTTCGACTTCGTGCCTAACCCTAGCGCGTTTGCGTCTCGAGCTTTCTCTGTCGGTTTGCTTGTTCTGTTGGCGGCGCCGTTGGGAATCCCGGTCCACTCTTACATGAAGGCGCGTGGGTTGGATTTGGAGGGGCGGGTTGAGGAACCGTTGCTTCGCGGAAACGGCAACGGAAATGAATGCGAGGTACAGAGAGGAAATGTGTTAGCGGAAGACGCGGAAGCGGTGGCGGTGGGAAAGAGTAGACCGGCGGTGGGGGAGGAGCACACAGTATGGGAGGTGCTGAGAACCGTGGACTTTTGGATTCTGTTCGTGTCGTTTCTTTGCGGGGTTGGAACTGGTTTGGCGGTTATGAATAATATGGGTCAAATCGGGTTGGCGCTGGGTTATTCGGATGTGTCACTCTTCGTGTCTTTGACTAGTATTTGGGGCTTTTTCGGTCGGATCGTCTCGGGTTCTGTTTCGGAGCACTTCATCAAGAGAGGGGGAACTCCAAGACCCCTTTGGAATGCAGGGTCTCAAATTTTGATGAGCGTGGGATACATACTGCTGGCCATGGCTATGCCAGGTTCACTTTACATAGGCTCCATTGTGGTTGGTATATGCTACGGAGTGAGGCTAGCCATCACTGTGCCAACAGCCTCAGAGTTATTTGGCCTCAGATATTATGGACTCATTTACAACATTCTAATCCTTAACCTTCCCCTTGGCTCTTTCCTCTTTTCTGGTCTGCTAGCTGGCATTCTCTATGATATGGAGGCTACTACCACCACAGGAGGAGGCAACACTTGTATTGGACCTCATTGTTACAGACTAGTATTCATTGTTATGTCTGCAGCCTGTCTTATCGGCTTCTTCTTAGACCTTCTTCTATCAATCAGAACCAAGATGCTTTACAAAAGAATCTACTTCACCAAAAACTCCAACAAAAACCCACTCACATCAACTAGGCAATGA 1626 0.5129 MGGDWSWSRRKWIGLVAAVWIQAISGNNYTFSNYSDALKSLMHLTQVQLNNLSVAKDVGKAFGLLAGLASDKFPTWIILLIGSVEGLVGYGVQWLVVSQRIQPLPYYQMCIFLCLGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFANDPASFLIMLALIPFVVCLSGIFFLREIPPAAVQDDEESTYFGVFNAVAVAVAVYLLAFDFVPNPSAFASRAFSVGLLVLLAAPLGIPVHSYMKARGLDLEGRVEEPLLRGNGNGNECEVQRGNVLAEDAEAVAVGKSRPAVGEEHTVWEVLRTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSEHFIKRGGTPRPLWNAGSQILMSVGYILLAMAMPGSLYIGSIVVGICYGVRLAITVPTASELFGLRYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTTGGGNTCIGPHCYRLVFIVMSAACLIGFFLDLLLSIRTKMLYKRIYFTKNSNKNPLTSTRQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03717 541 Gene3D MFS general substrate transporter like domains 5 202 IPR036259 -
Vimu10g03717 541 Gene3D MFS general substrate transporter like domains 315 520 IPR036259 -
Vimu10g03717 541 SUPERFAMILY MFS general substrate transporter 6 519 IPR036259 -
Vimu10g03717 541 CDD MFS_Mch1p_like 11 507 - -
Vimu10g03717 541 Pfam Nodulin-like 11 255 IPR010658 -
Vimu10g03717 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03717 Vimu-Chr10 46095167 46097734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03717 11 534 Nodulin-like Gene Family AT4G34950 67.818 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03717 - - gmx:100813607 871.307