Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03690 ATGAATTTTAGCTTGCTCTTTGAGACATTTGAAATGGGTTTCCGTTTCCCTGCAATTAGAAGGGCTACATTTACTGGTAGCCAATCATCTTCAAAAGCTGTAAACATGGCAAAGGGGTATCTTGCAGTGTATGTAGGAGAGAGAATGAAACGGTTTGTGATCCCCATGTCATCCTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCAGAGGAAGAATTTGGATACAATCATCCAATGGGTGGTCTCACAATTCCTTGCACAGAAGATGTCTTTTTGCATGTTATATCTAGCTTAAATGGGCTCTAA 312 0.4038 MNFSLLFETFEMGFRFPAIRRATFTGSQSSSKAVNMAKGYLAVYVGERMKRFVIPMSSLNQPSFQDLLSQAEEEFGYNHPMGGLTIPCTEDVFLHVISSLNGL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03690 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 100 IPR003676 GO:0009733
Vimu10g03690 103 Pfam Auxin responsive protein 23 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03690 Vimu-Chr10 45945955 45946266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03690 25 100 Calmodulin-binding Proteins AT3G43120 43.421 4.14e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03690 K14488 - gmx:113002386 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03690 10 45945955 45946266 Vimu10g03690 10 45945955 45946266 ECH