Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03685 ATGGCCGCGTCTAATCTCTCCACCCTGTGCTCCTCTTCACACTCCAAACCATCTTCTTTCCCTTTTTTCAACACTCAAAGCTTCAGCGTCAACAGTAACACTGTTTTTCTCAACAACACAAACTCTTTTCAAACCCTTCTCTCTCATTCCACCCACAATCCCCGCTATACTCTGCCTCTCCCATGCACTAAAACCACAAACACTTTCGACTCTGTCAATGATGACGAAAAGCCCCGCGAAGAGTGCGGCGTTGTGGGCATCTACGGCGACCCAGAAGCCTCCCGTCTCTGCTCCCTCGCCCTTCATGCCCTCCAGCACCGTGGCCAGGAAGGCGCCGGCATCGTCGCCGTCCACGACAACCTCTTCCACTCAGTCAACGGTGTTGGCCTCGTTTCTGACGTCTTCAATGAGTCTAAGCTCTCTGAGCTGCCCGGCTCCTGCGCCATTGGCCACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTTGTGAACGTCCAACCCTTTGTCGCCGGCTACCGCTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGACAACGGGTCCATCTTCAACACGACCTCCGACACCGAGGTCGTGCTCCACCTGATCGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTAGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCCGTGAGGGACCCCTTCGGGTTCCGGCCTTTGGTGATGGGAAGGAGAAAGAACGGCGCTGTGGTTTTCGCCTCGGAGGAGCCAAAGCAATGCATCTTCGAGCACATATACTTCGCACTTCCCAACTCTGTTGTCTTCGGGAGGTCTGTGTACGAGTCCAGGAGAAAATTCGGGGAAATACTGGCCACTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGCTGCGCTTGGCTACGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGGTTGATAAGGTCGCACTATAAAATAAGAGATTTTGGAGTGAAGCTGAAGCTGTCTCCGGTGCGTGGCGTGCTTGAAGGGAAGAGGGTTGTGGTGGTGGATGATTCCATTGTGAGGGGCACCACATCTTCCAAGATTGTGAGGCTGATAAAGGAGGCGGGTGCTAAGGAGGTCCACATGAGGATTGCGTGTCCACCCATTGTTGCGTCATGTTACTACGGTGTGGACACCCCCAGTAAGGAAGAATTGATTTCCAACAGGATGGATGTGGAGGAAATAAGGAAGTTCATTGGTTCTGATTCCCTCGCTTTTCTTCCCTTGGACACGTTGAAGACTTTGTTGGAGGATGATGCCCCTAACTACTGCTATGCTTGCTTCTCCGGGAAATACCCTGTTCAGCCAGACGAACTTAAACCCAACACCCTCAATGAGTTCGATTGGGACGATGCTTTCAATGGCAGTTTGAAACCTATTGAGGACGAGGTTTGGGCTAGAAACCAGGAGGCTGGGAATAACATTCTTAGTGTCTGA 1533 0.5375 MAASNLSTLCSSSHSKPSSFPFFNTQSFSVNSNTVFLNNTNSFQTLLSHSTHNPRYTLPLPCTKTTNTFDSVNDDEKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVHDNLFHSVNGVGLVSDVFNESKLSELPGSCAIGHVRYSTAGHSKLVNVQPFVAGYRFGSVAVAHNGNFDNGSIFNTTSDTEVVLHLIATSKHRPFLLRVVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRKNGAVVFASEEPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIVASCYYGVDTPSKEELISNRMDVEEIRKFIGSDSLAFLPLDTLKTLLEDDAPNYCYACFSGKYPVQPDELKPNTLNEFDWDDAFNGSLKPIEDEVWARNQEAGNNILSV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03685 510 Pfam Glutamine amidotransferase domain 145 264 - -
Vimu10g03685 510 CDD PRTases_typeI 296 419 IPR000836 -
Vimu10g03685 510 CDD GPATase_N 82 284 IPR035584 -
Vimu10g03685 510 Gene3D - 293 446 IPR029057 -
Vimu10g03685 510 PIRSF Pur1 6 54 IPR005854 GO:0004044|GO:0009113
Vimu10g03685 510 PIRSF Pur1 78 268 IPR005854 GO:0004044|GO:0009113
Vimu10g03685 510 PIRSF Pur1 264 479 IPR005854 GO:0004044|GO:0009113
Vimu10g03685 510 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 266 471 - -
Vimu10g03685 510 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 82 288 IPR017932 -
Vimu10g03685 510 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 82 289 IPR029055 -
Vimu10g03685 510 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 82 266 IPR029055 -
Vimu10g03685 510 SUPERFAMILY PRTase-like 269 468 IPR029057 -
Vimu10g03685 510 Hamap Amidophosphoribosyltransferase [purF]. 81 464 IPR005854 GO:0004044|GO:0009113
Vimu10g03685 510 Pfam Phosphoribosyl transferase domain 292 395 IPR000836 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03685 69 499 PRT Gene Family AT2G16570 70.325 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03685 K00764 - gmx:548065 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03685 10 45902392 45904098 Vimu10g03685 10 45902392 45904098 ECH