Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03585 ATGTCGGGAGGAGGAGGCGGTGACAACAGGCAGCTAGATCTCACGCCAACATGGGCTGTGGCTGCGGTGTTTGAAGAAAAAAAGAAACATGCGTTGCTAGAAGCTCTTGAAAAGATTAAAGCCGGAGGGGGCGCAGCAGCTGAACACGGAGCGGGTGCCGCAACTGAACACGGAGCGGGTGCCGCAACTGAACACGGAGCGGGTGCCGCAACCGATCACGGAGCTGGCGCTGCAGCTGAACTTGGTGGGGGTGGTGCAACGGAACATGGAATTGAACCTAAGACAGATGATGATGGCGGTGAGGGTGGCGGTGAGGGTGGCGGTGAGGGTGGCGGTGGGGGTAGCGGTGAGGGTGGCGGTGAGGCTGAAGGAGGTAGCCATCATCGCAGACTTTTTTCATACGAGCGTAGAGTTCTATCTGGTGGTGGTGGAGGCCCCAGTTGTAAACCGGGGTTCCTGCCTCTTATATCAGTGAGCGGGTTGCATCAGTTACACATTTTTATATTCTTCTTGGCTGTCTTTCATGTGATCTACAGTGCCATAACAATGACCCTTGGAAGAGCAAAGATTCGTGGGTGGAAGGTATGGGAAGAGGACCATATCGTGGATGAAGATGCCCTGAATGATCCTAGAAGATTCAGACTTACTCACGAGACATCATTTGTGAGGGAACACAGCAGTTTCTGGACTAAAACACCAGTTTCCTTCTATTTTGTATGCTTCTTTCGACAATTTTTCAGATCTGTTCGTAGGGCTGACTACTTGACCATGAGACATGGATTTGTTTCTGTTCATTTAGCACCAGGAAGTAAGTTCGATTTTCAAAAATATATCAAGAGGTCATTAGAAGATGACTTTAAGTCCGATACTCTGGGGATCAGTAGTGTTATTCTTGCTCGTGAATGTCCACGGTTTGTTTCTCATTTCTCACCTAATTATCAATTGGCTTCCCTGTTTTGCACTCCAGTGATTCTGGCTGTTGGAACAAAACTTCAAGCAATTATTACTCGGATGGCACTTGACATAAAAGAAAGGCATGCTGTAGTGCAGGGGATCCCTCTAGTGCAAGTGTCTGACAAATATTTTTGGTTTGCATGGCCTCAGTTAGTTCTTTATCTCATCCATTACGTCCTCTTTCAGTATGAATTTGGTTGGGCATCTTGCTTTTACGAGGATGATAAACTCATGATCGTCAGAGTAGCTCTTGGGCTGGGAGCTCAAGTCGTTTGCAGTTATGTCACACTTCCACTCTACGCACTGGTTACTCAGATGGGGTCGACGATGAAGAAGTCAATATTCGATGACCAAACATCGAAGGCGCTGAAACAGTGGCATAAGAATGCTCTGAAGAAGAAAACGTCAAAAGGACGCCAGGAAACTCGAACGTTGGGTGGGAGCCCGGGAGAACATACGCCGGGACATTCTTCGCCGCACCACCCACCACCACACAAAGACACAGAAATGGCTTCTCAGACCGCCACCATCGTCACCAGCGTTGATAACGAAACCTATGATAAGCGGGACCTTCTGAGTGGACCAGAGAAAGAGAGAGTTTTGGCAATGAGTTCGTCTTGCGCTTGCGCTTGCGCTTCTAATTCAACAAATTGGAGCATTGATTATGGAGATGCAATGCTTTCAAATTCAAAGCGAATCAGGTCAACGAAAATCGCCATGCCACTCTCGGTTTCTGGTTCCAGAAGATCCACGGCGCTTCTCATTTCATCGTTGCCGTTCACCTTCCTTTTGCTCTCTCCGCCGGCGGAGGCCAGACGCAACAAGAAGACAATTCCCCAAGAGGAATACCTCACAACTCCTGATGGATTGAAATACTATGATTTGGTTGAGGGCAAAGGTCCAGTAGCTGAAAAAGGAACAACCGTTCAGGTGCACTTTGATTGCTTATATCGCGGGATCACAGCTGTATCCAGTCGCGAATCTAAACTCCTAGCAGGAAATCGTATCATTGCTCAGCCGTACGAATTCAGGGTGGGAGCTCCTCCGGGAAAGGAAAGAAAACGTGAATTTGTTGATAATCCAAATGGTTTATTCTCTGCTCAAGCAGCACCCAAACCTCCACCTGCTATGTATACAATAGTAGAGGGAATGCGAGTTGGTGGAAAGCGAACTGTCATTGTTCCTCCTGAAAATGGGTATGGACAAAAGGGAATGAACGAGATTCCGCCTGGAGCTACATTTGAACTAAATGTTGAGCTTCTGCAAGTTTTAGCTACGTGA 2235 0.4779 MSGGGGGDNRQLDLTPTWAVAAVFEEKKKHALLEALEKIKAGGGAAAEHGAGAATEHGAGAATEHGAGAATDHGAGAAAELGGGGATEHGIEPKTDDDGGEGGGEGGGEGGGGGSGEGGGEAEGGSHHRRLFSYERRVLSGGGGGPSCKPGFLPLISVSGLHQLHIFIFFLAVFHVIYSAITMTLGRAKIRGWKVWEEDHIVDEDALNDPRRFRLTHETSFVREHSSFWTKTPVSFYFVCFFRQFFRSVRRADYLTMRHGFVSVHLAPGSKFDFQKYIKRSLEDDFKSDTLGISSVILARECPRFVSHFSPNYQLASLFCTPVILAVGTKLQAIITRMALDIKERHAVVQGIPLVQVSDKYFWFAWPQLVLYLIHYVLFQYEFGWASCFYEDDKLMIVRVALGLGAQVVCSYVTLPLYALVTQMGSTMKKSIFDDQTSKALKQWHKNALKKKTSKGRQETRTLGGSPGEHTPGHSSPHHPPPHKDTEMASQTATIVTSVDNETYDKRDLLSGPEKERVLAMSSSCACACASNSTNWSIDYGDAMLSNSKRIRSTKIAMPLSVSGSRRSTALLISSLPFTFLLLSPPAEARRNKKTIPQEEYLTTPDGLKYYDLVEGKGPVAEKGTTVQVHFDCLYRGITAVSSRESKLLAGNRIIAQPYEFRVGAPPGKERKREFVDNPNGLFSAQAAPKPPPAMYTIVEGMRVGGKRTVIVPPENGYGQKGMNEIPPGATFELNVELLQVLAT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03585 744 MobiDBLite consensus disorder prediction 47 126 - -
Vimu10g03585 744 Pfam Mlo family 133 466 IPR004326 GO:0006952|GO:0016020
Vimu10g03585 744 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 624 742 IPR001179 GO:0003755
Vimu10g03585 744 Gene3D - 586 743 IPR046357 GO:0003755
Vimu10g03585 744 SUPERFAMILY FKBP-like 593 741 - -
Vimu10g03585 744 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 619 739 IPR001179 GO:0003755
Vimu10g03585 744 PANTHER MLO-LIKE PROTEIN 1 116 493 IPR004326 GO:0006952|GO:0016020
Vimu10g03585 744 MobiDBLite consensus disorder prediction 447 490 - -
Vimu10g03585 744 FunFam Peptidylprolyl isomerase 584 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03585 Vimu-Chr10 45278919 45284066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03585 10 513 MLO family AT2G33670 48.358 1.57e-150 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03585 K08472 - gmx:100780855 599.742