Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03575 ATGCCTGTGGGAATGGATTTTCCTCCTCCTTTTGTTGTGATAGAGGACAAAGACAGTGCATTTGCAATGGAAGATGATAAATCGGGAGATTTGGATAATCTAAAACCAATAGTCAAGGGTAAGCCTCCCCGGCATGTTTCGAGTTTGAGGCACAGCGTTAGCACCACCAGATTGATGGCAGTAGCAGATTTGGTAAGTTTGGCATCTTCATCTGATTTGGCTTTGTGGAGTTTGGACGTGGGGGTTACTGGAAGCAAGTCATCCTCTGAAGAAAAGACGGAATTTCTACCAATATTTCGGTCAGGAAGTTGTGCTGAAAGAGGACCTAAACAGTATATGGAAGACGAACACGTATGCATTGATGATCTTATTCAGCATATAGGTCCTGCCTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTCGATGGCCATGGAGGTACAGACGCAGCTGTGTTCATAAGAAATAACATCCTCAAATTCATAGTTGAGGACTCCCATTTTCCAACTTGCGTGGGGCAGGCAATTACAAGTGCGTTCCTGAAAGCAGATTATGCATTTGCAGATTCTAGTTCTCTTGATATCTCCTCTGGGACCACTGCTTTAACTGCTCTTGTATCCGGAAGAGCTGTACTGGGGAGGAGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAGATTGCACTTCGGAAAGGCTAAGGATTGAGAAACTTGGTGGAGTGGTGTACGATGGATACCTGAATGGGCAGTTATCTGTTTCCCGTGCCTTGGGAGACTGGCACATGAAGGGTCCAAAGGGTTCTGCCTGCCCCTTGAGTTCTGAGCCAGAGCTGCAGGAAATCATCCTCACTGAGGATGACGAGTTCTTGATCATGGGCTGTGACGGCCTATGGGATGTAATGAGTAACCAATGTGCTGTGACCATGGCAAGGAAAGAACTAATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGCTGGTCAGAGAGGCTCTAAAGCGTAACTCGTGTGATAATTTGACTGTCATAGTGATATGTTTCTCCCCAGACCCTCCTCCTAGGATAGAGACAGCTCCTTCTCGGGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGGTGTGTTGGATTGTTAG 1149 0.4578 MPVGMDFPPPFVVIEDKDSAFAMEDDKSGDLDNLKPIVKGKPPRHVSSLRHSVSTTRLMAVADLVSLASSSDLALWSLDVGVTGSKSSSEEKTEFLPIFRSGSCAERGPKQYMEDEHVCIDDLIQHIGPASTIPLPGAFYGVFDGHGGTDAAVFIRNNILKFIVEDSHFPTCVGQAITSAFLKADYAFADSSSLDISSGTTALTALVSGRAVLGRRGRAIEMSKDQKPDCTSERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSSEPELQEIILTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETAPSRVRRSISAEGLNLLKGVLDC 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03575 382 PANTHER PROTEIN PHOSPHATASE 2C 88 347 IPR015655 GO:0004722|GO:0006470
Vimu10g03575 382 SMART PP2C_4 90 347 IPR001932 -
Vimu10g03575 382 Pfam Protein phosphatase 2C 101 341 IPR001932 -
Vimu10g03575 382 SUPERFAMILY PP2C-like 94 350 IPR036457 -
Vimu10g03575 382 ProSiteProfiles PPM-type phosphatase domain profile. 100 349 IPR001932 -
Vimu10g03575 382 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
Vimu10g03575 382 FunFam Probable protein phosphatase 2C 22 85 352 - -
Vimu10g03575 382 CDD PP2Cc 99 349 IPR001932 -
Vimu10g03575 382 Gene3D - 78 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03575 Vimu-Chr10 45243080 45245668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03575 3 381 PP2C-type Phosphatase Gene Family AT2G33700 68.101 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03575 K14803 - gmx:100778015 656.366