Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03561 ATGGAAGGAAGAACGGAAGAGGATTTGAGGAAACTCATAAATTACACGTTGGATGATTTGAAAAGTGCGACAAGAAACTTCAGACCAGACACGGTCCTAGGTGAAGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAGCAACACGTTCAAACCTTCGAGAGTTGGAGTTGGAATCCCCGTTGCTGTGAAGAAATCTAACCCCGATAGCCTTCAGGGGCACCTGTATGTTAAAAGTGATGTGTACGGATTCGGCGTTGTTCTGCTAGAATTGCTAACGGGCAGAGCAGCTCTGGACACAACCCTACCCACAGATATGCAGAATTTGGTGCAGTGTAGTATGTCATCTCTGAATGACAAAAAGAGACTGCAAAAGATAATGGACCCAAAATTGGACTACCGATATTCACCAAGGGCAGCGTTTCACATAGCCCAAGTTATCATCAAATGTTTAGAATCTGACCACAGAAAACGACCCTCCATGGTGGATGTTTTGGCAACCTTAGAAAAAGCACAAAGTATGAAGTACAGACCCAAAGGGAACAAAGCCTCCGCAATTCGTCAAACATCAGACGTGCATCACCCGAATTACCCACGTTCTTCACCATCACCGCTTCACTACAAAAACAACGATTAG 639 0.446 MEGRTEEDLRKLINYTLDDLKSATRNFRPDTVLGEGGFGRVFKGWIDSNTFKPSRVGVGIPVAVKKSNPDSLQGHLYVKSDVYGFGVVLLELLTGRAALDTTLPTDMQNLVQCSMSSLNDKKRLQKIMDPKLDYRYSPRAAFHIAQVIIKCLESDHRKRPSMVDVLATLEKAQSMKYRPKGNKASAIRQTSDVHHPNYPRSSPSPLHYKNND 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03561 212 SUPERFAMILY Protein kinase-like (PK-like) 12 70 IPR011009 -
Vimu10g03561 212 Gene3D Transferase(Phosphotransferase) domain 1 72 201 - -
Vimu10g03561 212 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu10g03561 212 PANTHER OS01G0588500 PROTEIN-RELATED 11 75 - -
Vimu10g03561 212 MobiDBLite consensus disorder prediction 184 212 - -
Vimu10g03561 212 Pfam Protein tyrosine and serine/threonine kinase 75 168 IPR001245 GO:0004672|GO:0006468
Vimu10g03561 212 Gene3D Phosphorylase Kinase; domain 1 13 71 - -
Vimu10g03561 212 SUPERFAMILY Protein kinase-like (PK-like) 72 175 IPR011009 -
Vimu10g03561 212 ProSitePatterns Protein kinases ATP-binding region signature. 33 66 IPR017441 GO:0005524
Vimu10g03561 212 MobiDBLite consensus disorder prediction 177 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03561 Vimu-Chr10 45150074 45152576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03561 71 190 Receptor kinase-like Gene Family AT4G02010 34.848 4.52e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vimu10g03561 PK_Tyr_Ser-Thr 4.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03561 - - gmx:100784079 168.318