Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03534 ATGCCTTCTCTTTCTGCCCTAAATATCTCTCTGCAATATCCTCCTGCTCGCAGAGACGACACCGTGGTTGAAGATTACCATGGCGTCAAAATTGCCGATCCTTACCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTACAGGAACAGGTTAAACTGACGGATTCGGTTCTTCAAAAATGCGAAACGAGAGACAAGCTCAGGGAAGGGATAACGAAGCTTTTTGACCATCCTCGTTACGGCGCGCCATTTAGACGAGCGGATAAGTACTTCTACTACCACAACACTGGGCTTCAGCCACAAGATATCCTTTATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGTGTTACTCGATCCCAATGGCTTCAGTGAAGACGGAACTGTGTCGCTGAGTACTCTGTCAGTAAGTGAAGATGGCAAATACTTGGCTTATGCTCTTAGTTCAAGCGGTAGCGATTGGACGACCATAAAAGTGCTTCGGATTGACGACAGAAATGTTGAGCCCGATACTTTACTGTGGGTAAAGTTCTCCTCAATTAATTGGACGCATGACAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCAAAAGATAGAGAAGTAGAACATGCTGGGACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTACCATTTTCTGGGTACAGATCAATCAGAAGATATTTTGTGCTGGAGAGATCCTGAAAACCCCAAATATTCGTTTGGAGGAGATGTTACTGATGATGGCCAGTACATTCTTCTCCATATTTCAGAAGGGTGCGATCCAGTCAACAAACTTTACTACTGTGACTTATCCAAAATTCCTAATGGGTTGGAAAGCTTTCGGAATGGAAATTCCCTCCTCCCATTTGTCAAACTTATTGATAACTTTGATGCACAGTATGAAGCCATTGCGAATGATGATACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAATTAGTCCGAGTGGATTTGAAAGAACCAACTACTTGGATTGATGTTGTACAAGAGTCAGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAACGGTAACCAACTGATAGTGAGTTACTTGAGTGATGTAAAGTATGTTCTGCAAGTTAGAGACTTAAAAACAGGTTCCTTTCTGCACCAATTACCAATTGATATTGGCTCAGTTTCTGAAGTTTCGGGACGGCGTGAAGATAGTGTGGTTTTCATTAGCTTTACAAGTTTTTTAACTCCTGGTATCATCTACCAGTGTAACTTGGGAACAGAGATTCCTGATATGAGGATATTTCGTGAAATTGTTGTCCCAGGGTTTGATCGATCTGAATTTCATGTTAAACAGGATTTCGTGAGTAGTAAAGATGCTACCAAAATCCCAGTGTTCATTGTTGCGAAAAAGGATATTATTTTGGATGGTTCACATCCATGTTTATTATACGGATATGGTGGTTTTAACATTAGCATTACACCATATTTCAGTGTCAGTCGCATTGTAATCACAAGACATTTAGGTGTTGTTTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCACAAAGCAGGCTCGCTTGCAAGGAAGCAGAATTGCTTTGATGACTTTATTTGTGCAGCAGAATACCTTGTATCTACGGGTTATACTCAACCCAAAAAGTTATGTATTGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGACTTATTTGGTTGCGCTCTAGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCGTGGACCTCAGATTATGGTTGTTCAGAAAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCTCCACTACATAATGTCAGGAGACCATGGGAACAGCATACTGATCAGTGTATTCAGTATCCATCAACTATGCTGTTGACAGCTGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGTTATTAGCGACCATGCAGCATGTCCTCTGTACTAGTTTGGAACAAAGTCTCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGTCTGGACATGGTGCTGGACGTCCAACACAGAAAATGATTGATGAAGCTGCTGACCGGTACAGTTTTATGGCTAAAATGTTAGAAGCACATTGGATTGAATAG 2196 0.4153 MPSLSALNISLQYPPARRDDTVVEDYHGVKIADPYRWLEDPDAEEVKEFVQEQVKLTDSVLQKCETRDKLREGITKLFDHPRYGAPFRRADKYFYYHNTGLQPQDILYVQESLEGEAEVLLDPNGFSEDGTVSLSTLSVSEDGKYLAYALSSSGSDWTTIKVLRIDDRNVEPDTLLWVKFSSINWTHDNKGFFYSRYPAPKDREVEHAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYSFGGDVTDDGQYILLHISEGCDPVNKLYYCDLSKIPNGLESFRNGNSLLPFVKLIDNFDAQYEAIANDDTVFTFLTNKDAPKYKLVRVDLKEPTTWIDVVQESEKDVLESACAVNGNQLIVSYLSDVKYVLQVRDLKTGSFLHQLPIDIGSVSEVSGRREDSVVFISFTSFLTPGIIYQCNLGTEIPDMRIFREIVVPGFDRSEFHVKQDFVSSKDATKIPVFIVAKKDIILDGSHPCLLYGYGGFNISITPYFSVSRIVITRHLGVVFCIANIRGGGEYGEEWHKAGSLARKQNCFDDFICAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSEKEEEFHWLIKYSPLHNVRRPWEQHTDQCIQYPSTMLLTADHDDRVVPLHTLKLLATMQHVLCTSLEQSLQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMAKMLEAHWIE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03534 731 FunFam Prolyl endopeptidase 81 440 - -
Vimu10g03534 731 PANTHER PROLYL ENDOPEPTIDASE 9 729 - -
Vimu10g03534 731 Gene3D - 81 440 - -
Vimu10g03534 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Vimu10g03534 731 SUPERFAMILY alpha/beta-Hydrolases 452 676 IPR029058 -
Vimu10g03534 731 Gene3D alpha/beta hydrolase 22 721 IPR029058 -
Vimu10g03534 731 FunFam Prolyl endopeptidase 403 721 - -
Vimu10g03534 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Vimu10g03534 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Vimu10g03534 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Vimu10g03534 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Vimu10g03534 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Vimu10g03534 731 Pfam Prolyl oligopeptidase family 496 726 IPR001375 GO:0006508|GO:0008236
Vimu10g03534 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 429 IPR023302 GO:0004252
Vimu10g03534 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03534 Vimu-Chr10 44945208 44957249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03534 510 613 Carbohydrate Esterase AT5G36210 34.906 4.92e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03534 K01322 - gmx:100776544 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03534 10 44945208 44957249 Vimu10g03534 10 44945208 44957249 ECH