LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g03508	ATGGAGTTGTGGAATGTGGTGTTTGTGTGGTGTGTTTTGTGTTTGGGTTTGGGTTTTCTTCATCACACTGAAGCCATTGTTAAGCTACGAGGAAATGAAACAATCCCAGCACTGATTTTATTTGGAGATTCGATCATGGACACAGGGGCTAACAACAACTTAATCACCGCGTTTAAGAGCAATTTTCCTCCTTATGGAAGGGATTTTCATGCTGCTCAACCAACAGGAAGATTCAGCAATGGCAAGTCAGTAATACCGTTATCTGAGCAACTGGAGCAGTTCAAAGAATATATAGGAAAGCTGAAAGCAAATTTTGGAGAAGCGAAAACGAACTTCATCTTGTCCAAAAGTTTAGTTCTTGTGGTATCAAGCAGCAACGACATTGCCAACACCTATTTTGCATCTGGAATTAGAAAACTGGATTACGACGTTCCCAGTTACACAGATATGTTAGTGCAGCTCGCCTCTTCCTTTGTTAAGGTTGGAGAAGGGCTTACAGATTTTTCCTATTTTGGACCGCCTCTTCTCCACTTGCACAATGGTACTGCTATGGGCATAACTGTGAGAAAGTCAAATGTTATTGCCTCATTGACTCAACATGTAACTGCTTTGCAAATTCCACATACATCTAGCACCTTTGGGCAACTTTTGTATCAATTTTCTGGAGGAACAAAACTGTCTATTTTGGGACTTCATCACATGCCTTTATCATTAAAGAGACTTGGAAATTTTGACGCTTTTACCTTTCCAATAGTATTGTCAAAGCAAAACGAAGTTTCTGAGGCAGCAACTGAAGTATCGTCATCAACGGGAATACGCACTTCTGGTGGTTCTGTTGCCTTGATGGCGGAGTCCAAAATTGATGGTTTTGGAAAACTTGGGGGTTGGTTTCAGATGAACAAATTAAATCCCCAATCTGTACAATTCGGTGTAAACTTATCTGATGATTCAGAAGATTCATTAGGCTGGGGTATGAGTCTCAGAAGATTCATAGAAAATTCAGAAAATGAGGCTCATTTTCAGGCTGAATCCTACCTAAGATTTAACATGGGTAATAAATTTTGCTTGAAGCCAGGCGTTGTATTGGGAACAGATGGGAAATCTAAAATAGCTGCTTTAATGCTTCGATCTAATTGGACCCTTTGA	1146	0.4005	MELWNVVFVWCVLCLGLGFLHHTEAIVKLRGNETIPALILFGDSIMDTGANNNLITAFKSNFPPYGRDFHAAQPTGRFSNGKSVIPLSEQLEQFKEYIGKLKANFGEAKTNFILSKSLVLVVSSSNDIANTYFASGIRKLDYDVPSYTDMLVQLASSFVKVGEGLTDFSYFGPPLLHLHNGTAMGITVRKSNVIASLTQHVTALQIPHTSSTFGQLLYQFSGGTKLSILGLHHMPLSLKRLGNFDAFTFPIVLSKQNEVSEAATEVSSSTGIRTSGGSVALMAESKIDGFGKLGGWFQMNKLNPQSVQFGVNLSDDSEDSLGWGMSLRRFIENSENEAHFQAESYLRFNMGNKFCLKPGVVLGTDGKSKIAALMLRSNWTL	381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g03508	381	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	38	49	IPR008265	GO:0006629\|GO:0016298
	Vimu10g03508	381	Gene3D	SGNH hydrolase	23	91	IPR036514	-
	Vimu10g03508	381	PANTHER	GDSL ESTERASE/LIPASE	149	381	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g03508	Vimu-Chr10	44715529	44720109	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu10g03508	12	172	Pollen Coat Proteome	AT1G75910	29.907	1.16e-16	78.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g03508	-		-	gmx:100777438	296.975