Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03405 ATGTCATACGAATACGAGAATTATGACCCCTCCTTCCCCGACCAACCTGTGGTTGACTTATACCTCCCTGTTTGGGCAAGGTTACCAACTTTCCACTCCAAACCAGCTTTCATTTGGGCTCAAGACTTACAAACCACCACTATCCTCACCTACCAACAACTCAACGACACTGTTCATCTCATCTCATCACAGCTGCAGGCTTCATTGCAAAGAGGAGACACTGTACTTCTTCTCTGCTCTCCAGGACTTGACCTAGTTGAGCTCATTTTCGGCTGCCAAAGAGCTGGTCTCTTGAGCGTACCTATAGTCCCTCCTCACCCTTCTTTCTCCAATCAAAACTATCACCACCTCGTAAGAGCCGTTTCTCAGACCAAACCCAAAGCTGCCATAGCTCACTCTCACTACATTTCAAGCATTCGACGCTACCTCTCTTCCCCCCACAACAATACCAAGCTTGCTCACATGCTGCAAACCATCCACTGGATTTCCATTGACCATGTCAAACATGGTAAAGCCGTCGTTACTGTAAACAACAACCGTGATTCCCTAACATACAGTGGTTGTGAAGCAGGTGAAGTTTATTTGGTTCAGTACACTTCTGGAGCCACTGGTGTCCCAAAACCCGTGCTTGTCACTGCTGGCTCAGCTGCTCACAACGTTAGAGCAGCCAGAAAAGCTTACGATCTTCATCCAAACAGCACCATCGTTTCGTGGCTGCCACAGTATCATGATTGTGGCCTCATGTTTCTGTTGCTGACCATTGTCTCCGGCGCCACGTGTGTTCTCACGTCCCCAAACGCGTTCATCAAACGCCCCAGACTCTGGCTTGAACTCTTGTCCGAATTCAAGGCCACTTGCACTCCCGTTCCCTCGTTCACATTGCCACTAGTCATCAAGCGTGGAGGGATTCACCAAGGCGCTTTACCCATCAACCTGTCAACTTTGAAGAACCTTATAATCATCAATGAACCTATCTATAGAGACTCTGTGGAAGAATTCGTTCATACTTTTTCACCATTCGGGTTAAGCCCTTCTTCTATCTCTCCTTCCTACGGGTTAGCAGAGAATTGTACCTTTGTGTCCACTGCGTGGAGGAACTGCCACAGTGATTTCCCAACTCACAACAAACTGTTACCGGTTGCGAGGCTCGGAAACGTGGAGCAGGAAGACGTGGAGATTATGGTCGTAAACGAAGAAACCTTGGAGCCGAGTGAGGATGGTGTCGAAGGAGAAATTTGGGTTGCTTCACCAAGCAATGCTTCTGGGTACCTTGGCCACCCTAGTTTAACAAGAGAGGTGTTTCATGGAAGACTGAGAAACATGGTTAGTAAGTGCTTTCTTCGAACCGGGGACAAAGGCATCGTGAAAGGAGAAAAGAGATATCTCTTTGTTACTGGTCGCTGTCAAGATGTCATGGAACTCGAAAACGGTGAAAAGGTTCATCCACATTACATAGAGACTGCGGCTTATAACGTTTGCTCCAAGTTACTCAGAGGAGGCTGCGTTGCAGCGTTTAAAGTTTCAGCAATGGTGGTGGTTGTGGCGGAGATGCAGAGGTTCGAAAAGGATGTGGATGTGGTTGTGTTGAAGTGGGTCTGCGAGAAAATTAAGGCAGGTGTCTGGAAGAAGGAGAAGGTAGAGATTGGATGGGTGGTTTTGGTTAAGAGTGAGAGTGTTCCCAAAACCACTTCTGGAAAATTGCAAAGAGGGAGGTGTAAGGAGAAGCTTCTCGCAGGGGAAATGGTGATTCTGATGGAGATGCGGTTTGAAAAAGATGTTACTGTTTTTACGAGAGCACAGAACGTAAGAGAAGAAGCTTCAGAAGAGAAGGGTTACGAGAACAGATCCCTTTCATGTATGGACACTCTAATGTCTCTTCTGTGA 1884 0.4724 MSYEYENYDPSFPDQPVVDLYLPVWARLPTFHSKPAFIWAQDLQTTTILTYQQLNDTVHLISSQLQASLQRGDTVLLLCSPGLDLVELIFGCQRAGLLSVPIVPPHPSFSNQNYHHLVRAVSQTKPKAAIAHSHYISSIRRYLSSPHNNTKLAHMLQTIHWISIDHVKHGKAVVTVNNNRDSLTYSGCEAGEVYLVQYTSGATGVPKPVLVTAGSAAHNVRAARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPNAFIKRPRLWLELLSEFKATCTPVPSFTLPLVIKRGGIHQGALPINLSTLKNLIIINEPIYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTAWRNCHSDFPTHNKLLPVARLGNVEQEDVEIMVVNEETLEPSEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNMVSKCFLRTGDKGIVKGEKRYLFVTGRCQDVMELENGEKVHPHYIETAAYNVCSKLLRGGCVAAFKVSAMVVVVAEMQRFEKDVDVVVLKWVCEKIKAGVWKKEKVEIGWVVLVKSESVPKTTSGKLQRGRCKEKLLAGEMVILMEMRFEKDVTVFTRAQNVREEASEEKGYENRSLSCMDTLMSLL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03405 627 SUPERFAMILY Acetyl-CoA synthetase-like 25 578 - -
Vimu10g03405 627 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 586 - -
Vimu10g03405 627 Pfam AMP-binding enzyme 30 474 IPR000873 -
Vimu10g03405 627 CDD FAAL 30 578 IPR040097 GO:0008610
Vimu10g03405 627 Gene3D - 474 591 IPR045851 -
Vimu10g03405 627 Gene3D - 9 468 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03405 Vimu-Chr10 43986866 43988782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03405 192 576 Monolignol Biosynthesis Gene Families AT4G19010 26.617 3.63e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03405 - - vum:124840866 1211.82