Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03364 ATGGTTACTTTAATTTTGGCTGGTTCAGATAGCACAGCAGGAACATTGGCATGGGCTCTCTCTTTACTTCTCAATAATCGCGAAATTCTAAAAAAGGCCACCAATGAATTAGATACAGAAATTGGGAGTAAAAGGATGGTAGATGTGTCAGATTTGAAGAAACTAAAGTATCTTGAATCTATCATCAAGGAAACACTACGTTTATACCCAGCTGCACCACTTAGTTTGCTACACGAGTCCATGGAAAATTGCACACTGAGTGGATATCATGTAGCATCTGGCACGCGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATGCAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAGGAAGTGGACGTGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATATGTCCTGGGATATCTTTCAGTCTCCAAGCGACAAAACTCACACTTGCTACCTTATTGCATGGGTTTGATATTGTAACTATTGATGGAGGACCTGTTGATATGGCTGAACAAATTGGCTTTACCAACATCAGAGCTTCTCCCCTCCAAGTCATTCTTACTCCGCGTCTAACTTCTCATATTTATGATAAAATCTAA 636 0.3947 MVTLILAGSDSTAGTLAWALSLLLNNREILKKATNELDTEIGSKRMVDVSDLKKLKYLESIIKETLRLYPAAPLSLLHESMENCTLSGYHVASGTRLLTNLSKLQRDPSLYANPLEFCPERFLTTHKEVDVKGQHFELIPFGAGRRICPGISFSLQATKLTLATLLHGFDIVTIDGGPVDMAEQIGFTNIRASPLQVILTPRLTSHIYDKI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03364 211 PANTHER CYTOCHROME P450 82C3-RELATED 2 208 - -
Vimu10g03364 211 SUPERFAMILY Cytochrome P450 2 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506|GO:0016705
Vimu10g03364 211 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS E-class P450 group I signature 148 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS E-class P450 group I signature 138 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03364 211 Pfam Cytochrome P450 2 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03364 Vimu-Chr10 43671048 43671768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03364 2 208 Cytochrome P450 AT4G31940 54.327 9.77e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03364 - - vra:106761706 344.739