Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03362 ATGGAAAATTGCACAGTGGGTGGATATCACGTAGCATCGGGCACACGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATGCAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAGGAAGTGGACGTGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTCGGTCTCCAAGCGATGCAACTCACACTTGCTACCTTATTGCATGGGTTTGATATTGCAACCAATGACGGGGGACCTGTTGATATGGTTGAACAGATTGGCTTTACCAACATCAGAGCCTCTCCCCTCCAAGTCATTCTTACTCCTCGTCTATCTTCTCATATTTATCATCAAATCTAA 396 0.4242 MENCTVGGYHVASGTRLLTNLSKLQRDPSLYANPLEFCPERFLTTHKEVDVKGQHFELIPFGAGRRMCPGISFGLQAMQLTLATLLHGFDIATNDGGPVDMVEQIGFTNIRASPLQVILTPRLSSHIYHQI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03362 131 Pfam Cytochrome P450 2 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03362 131 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 61 70 IPR017972 GO:0005506|GO:0016705
Vimu10g03362 131 Gene3D Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03362 131 PANTHER CYTOCHROME P450 82C3-RELATED 1 128 - -
Vimu10g03362 131 PRINTS E-class P450 group I signature 20 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03362 131 PRINTS E-class P450 group I signature 68 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03362 131 PRINTS E-class P450 group I signature 58 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03362 131 SUPERFAMILY Cytochrome P450 2 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03362 Vimu-Chr10 43665958 43666353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03362 1 128 Cytochrome P450 AT4G31940 52.713 2.03e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03362 - - vra:106761706 241.121