Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03359 ATGGCTTTCCACGAAAACCCTCTCACGCAGTACACAGTACCACTTGCCATCTCATTCTTCTGCCTATTCTTATTTCTCTTCGTTTTTTCATCTCTGTCCAGAAAGCCCAAAAACCACAGCGCAGCAACGAGAAAAGCACCACCAGAAGCAAGTGGCGCGTGGCCTTTGATTGGCCACCTCCACCTCTTAGGGGGGTCGAAACCGCCACACATTACTTTGGGCCACATGGCCGACAAATACGGTCCCATCTTCACCTTGCGTCTGGGAGCTCACAAAACCCTGGTTGTGAGCGACTGGAAAATGGCTAAAGAATGCTTTACCGTCAACGACAGAGCTTTCGCTAGCCGTCCCAAATCCATGGCCTTTGAATTGTTGGGCTACAACTTTTCCATGATTGGGTTCAGCCCCTATGGCTCTTACTGGCGCCATGTGCGCAAAATCGCCACGCTGGAGCTCCTCTCTTCGCATCGCTTAGACACTCTGAAGCACGTGATGGATGCCGAAGTGAAAGCAGCAATGAAGGACAGTTACAATTTGTGGTTGAAGAAGAAAGACGGCGGTTCCGAAATGAAGAGGTGGTTTGGGGACATAACATTGAACATTATGTTCAGGACGGTGGTAGGAAAACGTTTTGGTAGTGACGGTGTGAATGAAGAGAACGAACGGCTCCGAAAGGCATTGAGGGAGTTGTTTGATCTGAGCGGTTCATTCGCAGTTTCTGACTCTCTGCCGTATCTAAGATGGTTGGATTTGGATGGTATCGAGAAGAAAATGAAGAGAACGGCAAAAGAGTTAGATGGGTTTGTTCAGAATTGGATTGAAGAACACAAACGCACCAGAGGTTGTGATTTAGGTGAAGGGAAACATAACAAGGACCTCATGGACGTGCTTCTTGGGCTTGAGGAACAGGACGAAAAGTTTGACGGTCATGATCCTGACACCACAATCAAAGCTACGTGTCTGGCTTTAATATTGGCTGGTTCAGATACAACAACAGGAACATTGGTATGGGCTCTCTCGTTACTTCTGAATAATCCTGAAATTCTGAAAAAAGTGATCCATGAAATAGATATAGAAGTTGGGAGTGAAAGGATGGTAGAGATGTCAGATTTGAAGAAGCTAAAGTATCTTCATGCTATCATCAAAGAAACACTGCGTTTATATCCAGCAGCACCACTTAGTGTGCCACACGAGTCCATGGAAAATTGCACCGTGGGCGGATATCATAGAGATCCATCTTTATATGCAAATCCGCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAAGAAGTGGACATGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTCAGTCTCCAAGTGATGCAACTCACACTCGCTACCTTATTGCATGGGTTTGACATTGCAACCATTGATGGAGGACTTGTTGATATGGTTGAACAGATTGGCTTAACCAACGTCAAAGCTTCTCCCCTCCAAGTCATTCTTACTCCCCGTCTATCTTCTCATATTTATGAACAATAA 1545 0.4537 MAFHENPLTQYTVPLAISFFCLFLFLFVFSSLSRKPKNHSAATRKAPPEASGAWPLIGHLHLLGGSKPPHITLGHMADKYGPIFTLRLGAHKTLVVSDWKMAKECFTVNDRAFASRPKSMAFELLGYNFSMIGFSPYGSYWRHVRKIATLELLSSHRLDTLKHVMDAEVKAAMKDSYNLWLKKKDGGSEMKRWFGDITLNIMFRTVVGKRFGSDGVNEENERLRKALRELFDLSGSFAVSDSLPYLRWLDLDGIEKKMKRTAKELDGFVQNWIEEHKRTRGCDLGEGKHNKDLMDVLLGLEEQDEKFDGHDPDTTIKATCLALILAGSDTTTGTLVWALSLLLNNPEILKKVIHEIDIEVGSERMVEMSDLKKLKYLHAIIKETLRLYPAAPLSVPHESMENCTVGGYHRDPSLYANPLEFCPERFLTTHKEVDMKGQHFELIPFGAGRRMCPGISFSLQVMQLTLATLLHGFDIATIDGGLVDMVEQIGLTNVKASPLQVILTPRLSSHIYEQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03359 514 Gene3D Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 SUPERFAMILY Cytochrome P450 52 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PANTHER CYTOCHROME P450 82C3-RELATED 23 512 - -
Vimu10g03359 514 FunFam Cytochrome P450 82C4 37 504 - -
Vimu10g03359 514 CDD CYP82 81 506 - -
Vimu10g03359 514 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 Pfam Cytochrome P450 50 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03359 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03359 Vimu-Chr10 43648271 43650687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03359 18 512 Cytochrome P450 AT4G31940 49.240 2.49e-167 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03359 - - gmx:100787630 775.393