Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03358 ATGGCTTTCCACGAAAACCCTCTCACGCAGTACACAGTACCACTTGCCATCTCATTCTTCTGCCTCTTCTTATTTCTCTTCGTTTTTTCATCTCTGTCCAGAAAGCCCAAAAACCACAATGCAGCAACGAGAAAAGCACCACCAGAAGCAAGTGGCGCGTGGCCTTTGATTGGCCACCTCCACCTCTTAGGGGGGTCGAAACCGCCACACGTTACTTTGGGCCACATGGCCGACAAATACGGTCCCATCTTCACCTTGCGTCTGGGAGCTCACAAAACCCTGGTTGTGAGCGACTGGAAAATGGCTAAAGAATGCTTTACCGTCAACGACAGAGCTTTCGCTAGCCGTCCCAAATCCATGGCCTTTGAATTGTTGGGCTACAACTTTTCCATGATTGGGTTCAGCCCCTATGGTTCTTACTGGCGCCATGTGCGCAAAATCGCCACACTGGAGCTCCTCTCTTCGCATCGCATAGACACTCTGAAGCACGTGATGGATGCCGAAGTGAAAGCAGCAATAAAGGACAGTTACAATTTGTGGTTGAAGAAGAAAGACGGCGGTTCCGAAATGAAGAGGTGGTTTGGGGACATAACATTGAACATTATGTTCAGGACGGTGGTAGGAAAACGTTTTGGTAGTGACGGCGGTGTGAATGAAGAGAACGAACGGCTCCGAAAGGCACTGAGAGAGTTGTTTGATCTGAGCGGTTCATTCGCAGTTTCTGACTCTCTGCCGTATCTAAGATGGTTGGATTTGGATGGTATCGAGAAGAAAATGAAGAGAACGGCAAAAGAGTTAGATGGATTTGTTCAGAATTGGTTTGAAGAACATAAACGCAACAGAGGTTGTGATTTAGGGAATGGGAAACATAACAAGGACCTGATGGACGTGCTTCTTGGGCTTGCCGAACAGGGCGAAGAGTTTGACGGTCATGACCCTGACACCACAATCAAAGCTACGTGTCTGGCTTTAATTTTGGCTGGTTCAGATACGACAACAGGAACATTGGTATGGGCACTCTCGTTACTTCTGAATAATCCTGAAATTCTGAAAAAAGTGATCCATGAATTAGATACAGAAGTTGGGAGTGAAAGGATGGTAGAGATGTCAGATTTGAAGAAGCTAAAGTATGTTCATGCTATCATCAAAGAAACACTGCGTTTATACCCAGCAGCTCCTCTTAATTTGCCACACGAGTCCATGGAAAATTGCACTGTGGGCGGATATCATGTAGCATCTGGCACACGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCCTCTGTATATCAAAATCCCTCTGAATTTTGTCCAGAGAGATTCCTGACAACCCATAAGGAAGTGGATGTGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTCAGTCTCCAAGTGATGCAACTCACACTCGCTACCTTATTGCATGGGTTTGACATTGCAACCATTGATGGAGGACTTGTTGATATGGTTGAACAGATTGGCTTAACCAACGTCAAAGCTTCTCCCCTCCAAGTCATTCTTACTCCCCGTCTATCTTCTCATATTTATGAATAA 1590 0.4547 MAFHENPLTQYTVPLAISFFCLFLFLFVFSSLSRKPKNHNAATRKAPPEASGAWPLIGHLHLLGGSKPPHVTLGHMADKYGPIFTLRLGAHKTLVVSDWKMAKECFTVNDRAFASRPKSMAFELLGYNFSMIGFSPYGSYWRHVRKIATLELLSSHRIDTLKHVMDAEVKAAIKDSYNLWLKKKDGGSEMKRWFGDITLNIMFRTVVGKRFGSDGGVNEENERLRKALRELFDLSGSFAVSDSLPYLRWLDLDGIEKKMKRTAKELDGFVQNWFEEHKRNRGCDLGNGKHNKDLMDVLLGLAEQGEEFDGHDPDTTIKATCLALILAGSDTTTGTLVWALSLLLNNPEILKKVIHELDTEVGSERMVEMSDLKKLKYVHAIIKETLRLYPAAPLNLPHESMENCTVGGYHVASGTRLLTNLSKLQRDPSVYQNPSEFCPERFLTTHKEVDVKGQHFELIPFGAGRRMCPGISFSLQVMQLTLATLLHGFDIATIDGGLVDMVEQIGLTNVKASPLQVILTPRLSSHIYE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03358 529 PANTHER CYTOCHROME P450 82C3-RELATED 23 528 - -
Vimu10g03358 529 SUPERFAMILY Cytochrome P450 52 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 CDD CYP82 81 522 - -
Vimu10g03358 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Vimu10g03358 529 FunFam Cytochrome P450 82C4 37 520 - -
Vimu10g03358 529 Gene3D Cytochrome P450 32 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 Pfam Cytochrome P450 50 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03358 529 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03358 Vimu-Chr10 43641470 43643816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03358 18 528 Cytochrome P450 AT4G31940 50.760 5.77e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03358 - - gmx:100787630 811.601