Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03357 ATGGGCGACGCCATTCCGTTTCTGGGGTGGCTTGATTTGGGAGGTCAAGTAAAGGAGATGAAAAAAACGGCCATGGAAATGGATACCATCGTTTCTGAATGGTTAGAAGAACATCGCCAGAAAAGAGACACTGATGAGAGCAAAACAGAGCAGGACTTCGTTGATGTTTTGTTGTCAGTCCTTAAAGGAGTCGACCTTGCCGGTTACGATGTCGACACTGTCATAAAAGCCACCTGCACGATGCTGATTGCTGGAGCAACTGATACCACAGCAGTTACCATGACATGGGCACTGTCGTTGTTGCTAAATAATCGGGACGCATTGAAGAAAGTAAAAGATGAATTGGATGAACACGTGGGAAAAGAAAGATTAGTGAATGAATCGGATATAAACAATTTAGTTTATCTTCAAGCTGTGGTTAAAGAGACACTGCGATTGTATCCATCTGGGCCATTCTCTGGTCCACGCGAATTCACGGAAAATTGTACACTGGGTGGCTTCAACATCAAAGCGGGTACCAGATTTATATTGAACATTTGGAAATTACACAGAGATCCACGAATATGGACAAATCCATTGGAGTTTGAACCAGAAAGGTTCCTGAGCAGGCACAGAAGTGTTGATCTGAAGGGTCAGCATTTTGAACTCCTTCCCTTTGGTGGTGGAAGGAGGTTGTGCCCTGGCATATCATTTGGCCTTCAAATGACACACTTGGCATTAGCTTCTCTTTTGCAGGCATTTGAAATCACCACAGCATCCAATGCTCAAGTTGATATGAGTGCCACGTTTGGACTCACAAATATGAAAACCACCCCTCTCCAGGTTTTAATCAGACCCGCTTTATCACATCACCTACTCTTTACATAG 867 0.4394 MGDAIPFLGWLDLGGQVKEMKKTAMEMDTIVSEWLEEHRQKRDTDESKTEQDFVDVLLSVLKGVDLAGYDVDTVIKATCTMLIAGATDTTAVTMTWALSLLLNNRDALKKVKDELDEHVGKERLVNESDINNLVYLQAVVKETLRLYPSGPFSGPREFTENCTLGGFNIKAGTRFILNIWKLHRDPRIWTNPLEFEPERFLSRHRSVDLKGQHFELLPFGGGRRLCPGISFGLQMTHLALASLLQAFEITTASNAQVDMSATFGLTNMKTTPLQVLIRPALSHHLLFT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03357 288 SUPERFAMILY Cytochrome P450 3 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PANTHER CYTOCHROME P450 82C3-RELATED 2 284 - -
Vimu10g03357 288 PRINTS P450 superfamily signature 138 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS P450 superfamily signature 217 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS P450 superfamily signature 85 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 FunFam Uncharacterized protein 20 282 - -
Vimu10g03357 288 Gene3D Cytochrome P450 1 281 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 219 228 IPR017972 GO:0005506|GO:0016705
Vimu10g03357 288 PRINTS E-class P450 group I signature 94 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS E-class P450 group I signature 226 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS E-class P450 group I signature 178 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS E-class P450 group I signature 216 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 PRINTS E-class P450 group I signature 74 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03357 288 Pfam Cytochrome P450 10 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03357 Vimu-Chr10 43631590 43632799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03357 1 286 Cytochrome P450 AT4G31950 53.103 4.45e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03357 - - pvu:PHAVU_002G161900g 516.924