Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03356 ATGCATAAGATTACGGTTTCGGAGCTACTTTCTACCCGACGTGCTGAACAGCTTCGAGGAATTAGAGATTCGGAGGTGCAGAGTTCGTTGAAAGAACTATACGGAACGTTGGTGGAGAACAGAGGTGATTTGTTGGTGGAGATGAAGGAGTGGTTCGGGAACATGAATCTGAACGTGATTCTGAGGACGGTTGCGGGAAAGCGATACGGTGTGGGGAATGGAGATGAGGAACGGATGAGGGTTCGGAGGACATTAATAGCTGCAGCAACGGATACTACAACAGTTACTATGACTTGGGCATTATCGGTATTGTTGAATAATCGCGATGCCTTGAAGAAAGTTCAAGATGAATTGGACGAGCATGTGGGGATGGAAAAAGGGGTGAATGAATCTGATATAAACAAATTAGTTTACCTTCAAGCTGTAGTTAAAGAGTCAATGAGATTGTATGCAGCTGCACCACTACCTGGTCCGCGTGAATTCACAAGCGATTGTACTTTAGGTGGCTACCATATCCAAGCAGGTACGAGATTGATTTTGAACATTTGGAAGATGCAGAGAGATCCACGTGTATGGGAAAATCCATTGGAGTTTGAGCCAGAAAGGTTCCTCACAACCCACAAGGGTGTGGATGTGAAGGGTCAACATTTTGAGCTACTTCCCTTCGGTGGCGGAAGAAGGTCGTGCCCTGGCATGTCATTTGCCCTTCAAATGACACACTTAGCTTTAGCAGCTTTTTTGCAAGCATTTAAGGTCACAACACCGAACAATGAACCAGTTGACATGAGTCCCGTATTTGGACTCACATTCATGAAAGCCACCCCGCTTGAGGTTTTAATCCAACCTCGTTTACCACATCAAAGTCTCCTTAATTATGTATCCTAA 885 0.4497 MHKITVSELLSTRRAEQLRGIRDSEVQSSLKELYGTLVENRGDLLVEMKEWFGNMNLNVILRTVAGKRYGVGNGDEERMRVRRTLIAAATDTTTVTMTWALSVLLNNRDALKKVQDELDEHVGMEKGVNESDINKLVYLQAVVKESMRLYAAAPLPGPREFTSDCTLGGYHIQAGTRLILNIWKMQRDPRVWENPLEFEPERFLTTHKGVDVKGQHFELLPFGGGRRSCPGMSFALQMTHLALAAFLQAFKVTTPNNEPVDMSPVFGLTFMKATPLEVLIQPRLPHQSLLNYVS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03356 294 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 222 231 IPR017972 GO:0005506|GO:0016705
Vimu10g03356 294 PRINTS E-class P450 group IV signature 136 152 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS E-class P450 group IV signature 79 105 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS E-class P450 group IV signature 213 229 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS E-class P450 group IV signature 186 204 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS E-class P450 group IV signature 229 247 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS P450 superfamily signature 220 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS P450 superfamily signature 141 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS P450 superfamily signature 88 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PRINTS P450 superfamily signature 229 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 SUPERFAMILY Cytochrome P450 5 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 Gene3D Cytochrome P450 75 281 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03356 294 PANTHER CYTOCHROME P450 82C3-RELATED 1 78 - -
Vimu10g03356 294 Pfam Cytochrome P450 83 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03356 Vimu-Chr10 43627682 43629056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03356 1 76 Cytochrome P450 AT4G31950 43.590 5.45e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03356 - - gmx:100779080 348.977