Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03298 GAGTCTATTGCAAAACTGAAAGAAAAAGCCAACTCGGAATGCAATACCACAAAAATATCTTCGTTCCAATCACTGTCAGCACTTGTTTGGAGATGCATAACTCGGGCGCGGTGCTTGGCTCGTGATCAGAAAACAAGTTGCAAGTTATCGACAAACAACCGTACAAGAATGGATCCGCCACTGGCTGAGGAGTACTTTGGAAACTCGATTCATACACTGAATGCAGGAACAGCGACCTCAGGGGAATTGCTTGAGAATGGTCTGGGATGGGCAGCATGGAAGTTGCACATGGCTGTTATAAATCATAACGACAGAGTGGTGTTGGGATGGGTGAGAGAGTGGTTAAAGTGTCCTCTAATATATCAACTTGGTCGTTATTTTGACCCCTACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCAGTAGCAGTTAGAAGTGGGTATGCCAACAAATTTGATGGAAAAGTTACGTCATATCCAGGCCATGAAGGAGGAGGAAGCGTGGATTTAGAAGTATGTCTTTCTCCATCTGTTATGACTGCGCTGGAATCCGACCAGGAGTTCATGGATTCAGTTTCAGCTTCCAATCCTCTCTAG 630 0.4492 ESIAKLKEKANSECNTTKISSFQSLSALVWRCITRARCLARDQKTSCKLSTNNRTRMDPPLAEEYFGNSIHTLNAGTATSGELLENGLGWAAWKLHMAVINHNDRVVLGWVREWLKCPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPSVMTALESDQEFMDSVSASNPL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03298 209 Pfam Transferase family 2 200 - -
Vimu10g03298 209 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 200 - -
Vimu10g03298 209 Gene3D - 1 196 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03298 Vimu-Chr10 43171140 43172070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03298 1 194 Monolignol Biosynthesis Gene Families AT5G48930 27.919 3.21e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03298 - - gmx:100787228 369.007