Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03292 ATGGGTACTCCTGCCCTACGACGCATTTCGGAGTGTTTTGTGAAGCCTCACCGCTCCAACCACTTCTCCGATCAAATCTGCAATTTAACACCTTGGGATATTGCCATGTTGTCTGTGCACTATATTCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACCCTGCTTCATCAAAACGATTTCATACAAAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTTTATCCATTGTCTGGTCGCCTTGTCACTCACAAAACCCAAAACCCTCCATCTTATATTGTTTCTGTTGATTGCAACAACAGTGATGGAGCTAGATTCATTCATGCAACTCTGGATATCACCATAGCTGATATCCTCTCCCCTTTTGATGTCCCACCAATTGTTCAATCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACTCCATGCCGCTGTTGTCCATCCAAGTCACTGAACTAGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCATGTTATTGGCGATGGAACATCTTATTGGAATTTCTTCAATTCATGGTCTCAGATCTTTCAAGCACAATCTCAATCTGAAAACCTTGGATACGATGTTCCCATCTCACGCCAACCCATTCACAATCGTTGGTTTCCAAATAATTGTAGACCACCGATCTCTCTTCCTTTCAAACACCATGACGAGTTTATAGAGAGATCTGAAAAACCCCTACTCCTGAGAGAGAGATTTTTCCACTTTTCAGCAGAGTCTATTGCCAAACTGAAAGCAAAGGCCAACTCAGAATCCAATACCACAACAATATCTTCCTTCCAGTCATTATCGGCACTTGTTTGGAGGTCCATAACTCGTGCGCGCTCTATACCGTCTGACCAAAAAACAACTTGCAGATTAGCCGCAAGCACTCGATCAAGAATGGAGCCGGCTCTGCCTGAAGAATACTTTGGAAATTGCCTTCAAGTAGTGAGTGCAGAAACGACAACAGGGGAATTACTTGAGAATGATCTAGGATGGGCGGCATGGAAATTGCATGTGGCTGTTAAAAACCTTAACGATAGAGTGGTGTTGCAGTATCTCCGAGAGTGGTTAGATTCTCCTGTGATATATCAAATGGGTCGTTTCTTTGAACCATATTGTGTGATGATGGGTAGCTCCCCGAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGCTAGAAGTGGCTATGCAAATAAATTTGATGGGAAAGTGTCATCATACCCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTCTCACATACAATGAGTGCCTTGGAATCAGACAAGGAATTCATGCATGCAGTTTCTCACTTCAATCCCCTTCTGTTCTAG 1392 0.4389 MGTPALRRISECFVKPHRSNHFSDQICNLTPWDIAMLSVHYIQKGLLFKKPATLLHQNDFIQNLLEKLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYIVSVDCNNSDGARFIHATLDITIADILSPFDVPPIVQSFFDHHKAVNHDGHSMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNSWSQIFQAQSQSENLGYDVPISRQPIHNRWFPNNCRPPISLPFKHHDEFIERSEKPLLLRERFFHFSAESIAKLKAKANSESNTTTISSFQSLSALVWRSITRARSIPSDQKTTCRLAASTRSRMEPALPEEYFGNCLQVVSAETTTGELLENDLGWAAWKLHVAVKNLNDRVVLQYLREWLDSPVIYQMGRFFEPYCVMMGSSPRFNMYGSEFGMGKAVAARSGYANKFDGKVSSYPGREGGGSIDLEVCLFSHTMSALESDKEFMHAVSHFNPLLF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03292 463 FunFam Tryptamine hydroxycinnamoyl transferase 230 449 - -
Vimu10g03292 463 Gene3D - 231 447 IPR023213 -
Vimu10g03292 463 Pfam Transferase family 14 452 - -
Vimu10g03292 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 452 - -
Vimu10g03292 463 Gene3D - 8 225 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03292 Vimu-Chr10 43128649 43130040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03292 48 446 Monolignol Biosynthesis Gene Families AT5G48930 26.761 2.89e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03292 - - vra:106761257 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03292 10 43128649 43130040 Vimu10g03292 10 43128649 43130040 ECH