Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03278 ATGGAAAGTGGATTACCTTTGCTTAACTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTTCCACTTCTTCTTCTAAGTGGGTTTATGCTGTCTTCTGGAGGATACTGCCTCGAAACTTTCCTCCTCCAAGGTGGGAATTTGGAGGAACTGCGCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATTCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAACAGAGGAAGAGTGGTAGTGGTTACTTGAACGGTAGATTTGGAGCTGACGTATTCTTCAAAATGTCGCATGAAGTTTACAATTATGGAGAGGGACTAGTGGGAAAAGTTGCCGCAGATAATGGTCACAAATGGGTTTACAACGAGAGTCACAACAGCGAGTGTGAAGCTAGCTATATTGCTACATGGAACACTTCGGTAGAGCCTCAACCAAAGGCATGGGAGTCTCAGTTCAATTCAGGCATTCAGAGTATAGTCATAATAGCAGTCAGAGAAGGCGTTGTGCAATTGGGTTCTTTTAACAAGATTGCAGAGGACCTGAATCTGGTGATCAGCATACAGAGACAATTCAGCTACCTCCAAAGCATACCGGGTGTGTTTGGTATTCAAAGATCATACCTACCGATTCAACATCCATACATTGTAAAGCCCAGTTTCATAGAAAGCAATGGAATGCCTCCATATGACATGGCCTGGAACAACAACCCTCAAATTGGAGCACCAGGCCCATCTCTTTGTTCAGGTTCTCCACCTTTACAATTACCATTATCATTACCAACCATGCCTTGCAGTTTTGGAGCTTTGCTATCGAAGTTACCATCTGGAATCCCACTGCATAATCAAGTCCCTAATTCTGGGACACAGAGCAGCACCATCGAGAGAGTGAAGATTGAGGACTGCGAATTTTATCCTACCCATGACGGTGATCACAAGGGAAAGGTTCCTTCCTTGAACGAGTAG 975 0.4431 MESGLPLLNCLLQQTLRTICTSSTSSSKWVYAVFWRILPRNFPPPRWEFGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGADVFFKMSHEVYNYGEGLVGKVAADNGHKWVYNESHNSECEASYIATWNTSVEPQPKAWESQFNSGIQSIVIIAVREGVVQLGSFNKIAEDLNLVISIQRQFSYLQSIPGVFGIQRSYLPIQHPYIVKPSFIESNGMPPYDMAWNNNPQIGAPGPSLCSGSPPLQLPLSLPTMPCSFGALLSKLPSGIPLHNQVPNSGTQSSTIERVKIEDCEFYPTHDGDHKGKVPSLNE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03278 324 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 195 IPR025610 -
Vimu10g03278 324 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03278 Vimu-Chr10 43004446 43006079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03278 13 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.383 7.59e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03278 - - vum:124839635 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03278 10 43004446 43006079 Vimu10g03278 10 43004446 43006079 ECH