Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03240 ATGGCCGAACCAAGGGTTTTCACTTTCTCACAGGTTGCTCAGCACAGATCCAACAAAGACTGTTGGGTGGTGATCAATGGAAGAGTTTTGGATGTGACAAGGTTTTTGGAGGAACACCCGGGAGGGGAAGAGGTGATTCTAGAAGTGGCTGGGAAGGAGGCGACGAAGCAATTTGATGCGATTGGACACAGCAAAGCAGCACAAAAGATGGTACTAAAGTACCAGGTTGGTGTTCTCGAAGGTGCCAAGGTTGAAGAGGTAGACATGAACGATGATGTTGTTGAGATGGAATCCAACAGCAAAGAGATGAGTGCCTTCGTCATCAAAGATGGTGCAAACTATAATAAGTCAATCTCATTTTACGAGTTCTTTGTTCCTCTTCTTGTTGCTGCTCTCTACTTTGGCTATCGATGCCTCACCGTCCCTCAATACTAG 435 0.4598 MAEPRVFTFSQVAQHRSNKDCWVVINGRVLDVTRFLEEHPGGEEVILEVAGKEATKQFDAIGHSKAAQKMVLKYQVGVLEGAKVEEVDMNDDVVEMESNSKEMSAFVIKDGANYNKSISFYEFFVPLLVAALYFGYRCLTVPQY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03240 144 Gene3D - 2 85 IPR036400 -
Vimu10g03240 144 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Vimu10g03240 144 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Vimu10g03240 144 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Vimu10g03240 144 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Vimu10g03240 144 PANTHER CYTOCHROME B5 3 139 - -
Vimu10g03240 144 SMART Cyt_b5_2 7 80 IPR001199 -
Vimu10g03240 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Vimu10g03240 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Vimu10g03240 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Vimu10g03240 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Vimu10g03240 144 FunFam Cytochrome b5 type B 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03240 Vimu-Chr10 42785129 42785668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03240 5 140 NADPH P450 reductases AT5G48810 42.857 4.04e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03240 - - gmx:113001935 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03240 10 42785129 42785668 Vimu10g03240 10 42785129 42785668 ECH