Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03238 ATGAAGGAAGCCGAGGAGCAACTGTGCGAGGCCGCCAGAAAGGGTGACACGGAGAGAGTAAAGGCTCTCATAGACTCCGGCGCCGATGTCACCCACTTTGACGGCGAGGGCCTCAACCCTCTCATGCACGCCGCAAAGCAAGGCCATGCACTCGTCCTCACTCTCCTCCTCTCCGCCGGCGCTCCGTGGAACGGCCTCTCTCCCTCCGGCCTCTCCGCCGGCGACTACGCCATGCAGGAAGGTCACAGCGAAGCCTTCGACCTTCTTCTAAACGCCGGGATTCAGGCCGAACTGATCCTGGGAACAATTGCGAGGAAGGAAAACAAGAGTGAAGATTCCGGTGTCGATTATTTGGAAGATAGGGTGAGTTTTAGCGAAGACAAGCTCATGGACTCTGAAAGCAAAGCTGTGATGATGGCGTGGGAGAAGCCGTTGATGGAGGCTCATGCCAAAGCTGTTTGTTCGGGAGGGGGCCACGTGCTCAATGTTGGGTTCGGAATGGGGCTCGTGGATTCGGCCATTCAGCAGTATGCACCTGCATCACACACCATCGTTGAGGCTCATCCGGAGGTGTATCAACGCATGCTTCGCTCCGGTTGGGGTCAGAAGGAAAATGTGAAGATAGTTTTTGGCCGATGGCAGGATGTTCTGTCTCAGCTTGAAACATATGATGGTAATTTCTAA 684 0.5512 MKEAEEQLCEAARKGDTERVKALIDSGADVTHFDGEGLNPLMHAAKQGHALVLTLLLSAGAPWNGLSPSGLSAGDYAMQEGHSEAFDLLLNAGIQAELILGTIARKENKSEDSGVDYLEDRVSFSEDKLMDSESKAVMMAWEKPLMEAHAKAVCSGGGHVLNVGFGMGLVDSAIQQYAPASHTIVEAHPEVYQRMLRSGWGQKENVKIVFGRWQDVLSQLETYDGNF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03238 227 Pfam Ankyrin repeats (3 copies) 8 95 IPR002110 GO:0005515
Vimu10g03238 227 SUPERFAMILY Ankyrin repeat 8 96 IPR036770 -
Vimu10g03238 227 FunFam Protein arginine N-methyltransferase 2 1 101 - -
Vimu10g03238 227 SMART ANK_2a 69 98 IPR002110 GO:0005515
Vimu10g03238 227 SMART ANK_2a 3 32 IPR002110 GO:0005515
Vimu10g03238 227 SMART ANK_2a 36 65 IPR002110 GO:0005515
Vimu10g03238 227 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 6 225 - -
Vimu10g03238 227 ProSiteProfiles Ankyrin repeat region circular profile. 36 61 - -
Vimu10g03238 227 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Vimu10g03238 227 Gene3D - 1 106 IPR036770 -
Vimu10g03238 227 ProSiteProfiles Ankyrin repeat profile. 3 35 IPR002110 GO:0005515
Vimu10g03238 227 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 224 IPR029063 -
Vimu10g03238 227 Gene3D Vaccinia Virus protein VP39 107 227 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03238 3 93 MAP Kinase Kinase Kinase AT2G31800 35.165 2.16e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03238 K18477 - gmx:100527621 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03238 10 42775858 42776614 Vimu10g03238 10 42775858 42776614 ECH