Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03233 ATGCGGGTTGCGAATTGCTCCATTTCGTGGTCGTTTGGGTCAGCCGTCACTGCCGCTCTCCCCTCTTTCCCTTCTTCTAGATTCCCTCCGCTCCTCCCTTTCTCACTCCCTTCTTCCAATCCTCCTCCGTCCACCGTCCTCCGCCGTTCCACTTCTTCTGCTAGACGAGTGACCAGAATGGCTCTGAAAAACGCTAAAGATGCACAAGACCCGCGCTTGGAGAGAATCTCCTCTGCAATCCGAGTCATCCCTGATTTTCCCAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATCCCAAGGCTTTCAAAGACACCATCGATCTTTTTGTTGAGAGGTACAGAGATCAAAATATCAATGTTGTCGCAGCGCAAGGGTCAAATCATTATAGGTATTCATGCATTATTGGTGTTGTTAACTTTGACCTTCGTGTGAGCTTCACTCCGTACTTATGTCCGAATGCAGGTGTTGAAGCAAGAGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGCATATTTTCTGTACCTTTCTTTTCAAATCCCTACTTAACAGATAATTGTGTTTCGAGGCCTTTGAATCTCTGTGTTGTGTATGGGGAGGTTATATCAGAAGAGTATTCTTTGGAGTATGGAAAAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGGGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACGTTAGATGCTGCAATTAAGCTACTAGGTAAACTTGTCAATATTACTGCATTTTGGGCTAGACAAGGAAAGCCCATTTTGGGTAAAAGTTAG 867 0.451 MRVANCSISWSFGSAVTAALPSFPSSRFPPLLPFSLPSSNPPPSTVLRRSTSSARRVTRMALKNAKDAQDPRLERISSAIRVIPDFPKPGILFQDITTLLLDPKAFKDTIDLFVERYRDQNINVVAAQGSNHYRYSCIIGVVNFDLRVSFTPYLCPNAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGIFSVPFFSNPYLTDNCVSRPLNLCVVYGEVISEEYSLEYGKDKMEMHVGAVQPGERALVIDDLIATGGTLDAAIKLLGKLVNITAFWARQGKPILGKS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03233 288 SUPERFAMILY PRTase-like 78 269 IPR029057 -
Vimu10g03233 288 Gene3D - 157 276 IPR029057 -
Vimu10g03233 288 Gene3D - 63 134 IPR029057 -
Vimu10g03233 288 CDD PRTases_typeI 158 267 IPR000836 -
Vimu10g03233 288 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 64 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03233 Vimu-Chr10 42746892 42749029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03233 66 270 PRT Gene Family AT1G27450 56.585 1.12e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03233 K00759 - gmx:100777103 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03233 10 42746892 42749029 Vimu10g03233 10 42746892 42749029 ECH