Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03152 ATGACCAACTCCACCTGCGCAGGCGCTGAGTTCGACCAGTGCCGAGACGAGCCGGCGGCGTTGGTTCTCAAATTCGTCGCCATAGCCTCCATTCTCCTCTCCGGCATGGCCGGAATCGCGATCCCCCTCGTCGGAAAACACCGCCGCTTCCTCCGCACCGACGGCAACCTCTTCGTGGGTGCCAAGGCCTTTGCCGCCGGGGTCATTCTGGCCACGGGATTCGTCCACATGCTCTCTGATGCCACCGAAGCGCTCCAGCACCCGTGCCTGCCTTCCTTCCCGTGGTCCAAGTTCCCCTTCACCGGCTTCTTCGCCATGATGGCCGCGCTCTTCACTCTCCTCCTCGATTTCGTGGGAACGCAATACTACGAGCGCAAGCAGGGGCTCAACCGTCCCTCGGAGGAACAGTCTCGGATCGGGTCGTCCGAATCCGGAGGGAAGGTGTTTGGAGAAGAAGAGAGTGGGGGAATGCACATCGTGGGGATGCATGCACACGCCGCGCATCATCGACATAACCACCCCCATGGCCATGACTCGTGCCATGGCATTGGCAGCGAGAAGGAACAAGTTAACGCGCTTGCTGACTCCCATGGACACGGACACGGTCACGGTCACGGTCACCTCCCCGGCCACTCCCACTTGGAAGATGTCGAAGAAACCGACGTTCGACACGTGGTGGTTTCTCAGGTGTTGGAGCTTGGGATTGTGTCACATTCGGTTATAATCGGGTTGTCTCTTGGGGTTTCTCAAAGTCCTTGTACCATAAGGCCTCTGATTGCGGCGTTGTCTTTTCATCAGTTTTTTGAAGGGTTTGCGCTTGGAGGGTGCATTTCCCAAGCGCAGTTTAAAGCTTCCTCAGCAACCATAATGGCTTGTTTTTTTGCATTGACTACACCGTTGGGTGTTTCGATCGGAACGGCCATTTCTTCAAGGTTTAACCCTTACAGCCCCGGTGCACTGATCACCGAAGGTATTCTGGATTCCTTGTCGGCGGGGATTTTGGTGTATATGGCTTTGGTAGATTTGATAGCTGCGGATTTTCTTAGCAAGAGAATGAGTTGTAACTTCAGGCTACAGATAGCCTCTTACTGCATGCTTTTCCTTGGGGCTGGATTGATGTCTTCCCTCGCAATTTGGGCCTGA 1143 0.5529 MTNSTCAGAEFDQCRDEPAALVLKFVAIASILLSGMAGIAIPLVGKHRRFLRTDGNLFVGAKAFAAGVILATGFVHMLSDATEALQHPCLPSFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGLNRPSEEQSRIGSSESGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGHDSCHGIGSEKEQVNALADSHGHGHGHGHGHLPGHSHLEDVEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVSIGTAISSRFNPYSPGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSSLAIWA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03152 380 PANTHER ZINC/IRON TRANSPORTER 20 373 - -
Vimu10g03152 380 NCBIfam ZIP zinc/iron transport family 7 380 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vimu10g03152 380 Pfam ZIP Zinc transporter 23 377 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu10g03152 380 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03152 Vimu-Chr10 42141503 42142747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03152 2 380 Inorganic Solute Cotransporters AT1G60960 71.611 1.31e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03152 K14709 - gmx:100812212 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02830 1 40597500 40601533 Vimu10g03152 10 42141503 42142747 PCT