Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03141 ATGAAGATGGTACGATGTTCACGCATGGGGATTGATGGCGTGGTGACTATGAAGGTACTACACACCAAAGGCTTCGTACCTTTTTATGCCTTTATCAACAATCGCGCCTACATTAGCTTCCTTCAAAGAAGCAAAGCTAAACTCAACACCTGCTTCATAATGGGTGCATCAGGAAAATGGGTGAAGGCTTTAATCGGACTCAAGAAACCAGACAAGGACGAACATGTGAAAGAGGGTGGTAAGAGCAAAAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGATGTGGGTTCTTGGAAGGCTTTCAAAGGAAACCACCACAAAGCAGCTTCTGAAGGCTCTGATTCTCCACCTGTTGTAGCAGCAGATGCTTACACAGCCGCAGTAGCCACTGTGGTTCGAGCACCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCCGCCATAAGAATCCAAACTGCCTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAAGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAACAAGCTGCGGTGACACTGAGGTGTATGCAGGCCTTGGTTCGGGTTCAGGCTCGTGTAAGAGCTCGTCGTGTGAGAATGTCCATAGAGGGGCAAGCTGTGCAGAACATGCTTAACGAAAGGCGCAGTAAGCTTGAACTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACTGTGGAAGATGTTAAAGCAAAGATTCAGATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCCATTGCTTACTCTCTTGCTCAAAAGCAATGCAGATCAACCTCAAGTTATAATTCACGAACTAGTGGCTCTGTTTCCTCTCTGAAGAGCCATGAGATCAACAAAGCTAACTGGGGGTGGACTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAGCAATCTCAGGCTGAAGGCTTGTTAGATAAAACCCCACATCCAAAGAAGCTTGAGGAATCCTTTGTGAACTCTAATTCCAAATCATGTTTGGTCAAAGTCAAGAAGAACAACATGACAACAAGGGTTTCTGCTAGGCCTCCCCTTTTTGGCCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGTTCTGCATCATCTTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGATGACAGTAATGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCTAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTTTCAAAAGGGCAGCGGTTCTCTCCAATGGAGATTCCAAAAGCACTGCAGGTTCTGACCCTTCAATCAACCTTTCTAGACCACTTCACTTGGACAAGGGCTCGGTGAGGCCGCGGTGA 1488 0.4677 MKMVRCSRMGIDGVVTMKVLHTKGFVPFYAFINNRAYISFLQRSKAKLNTCFIMGASGKWVKALIGLKKPDKDEHVKEGGKSKKWRLWRSSSGDVGSWKAFKGNHHKAASEGSDSPPVVAADAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRSKLELLKQAEEGWCDSRGTVEDVKAKIQMRQEGAFKRERAIAYSLAQKQCRSTSSYNSRTSGSVSSLKSHEINKANWGWTWLERWMAAKPWESRLMEQSQAEGLLDKTPHPKKLEESFVNSNSKSCLVKVKKNNMTTRVSARPPLFGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYNRAQRQQSMDEFQFFKRAAVLSNGDSKSTAGSDPSINLSRPLHLDKGSVRPR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03141 495 ProSiteProfiles IQ motif profile. 168 195 IPR000048 GO:0005515
Vimu10g03141 495 MobiDBLite consensus disorder prediction 466 495 - -
Vimu10g03141 495 MobiDBLite consensus disorder prediction 367 421 - -
Vimu10g03141 495 PANTHER IQ-DOMAIN 5-RELATED 54 462 - -
Vimu10g03141 495 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03141 Vimu-Chr10 42071899 42075402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03141 54 495 IQD Protein Family AT2G26180 59.594 2.16e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03141 - - gmx:100799714 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02808 1 40389865 40392128 Vimu10g03141 10 42071899 42075402 PCT