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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu10g03114
ATGGAAGAAAAGGACTGGCTATCCTTGGTTGCCGTGCACAGTGATACATGGTTAATTTCTGTGGCTATGTATTTTGGTGCAAGATTTGGATTTGATAAGGCTGATAGGAAGAGTCTTTTTAGTATGATAAATGATCTTCCAACAATATTTGAGGTTGTTGCTGGGAAGGCCAAGAAACAAGGAAAGGAGAAGTCATCAGTCTCTAATCATGACAATAACAAATCTAAATCAAACTCTAAGAGAGGTTCTGAATCACAAGAAAAGTATTCAAAATCAATGGAACCAAAGAATGAGAGTGCTTTGGAAAAGGATGATGAGCACGGAGATGGATTATGCGGGGCATGTGGAGAGAACTATGCTCATGTTGCTGACGCTGACGAGTTCTGGATTGGCTGTGACATTTGTGAGAGGTGGTATCATGGGAAATGTGTGAGGATTACTCCTGCGAAGGCTCAGAATATCAAGGAGTACAAATGTCCATCTTGCAGCAACAAGAGAGTTCGTCAATAG
510
0.4098
MEEKDWLSLVAVHSDTWLISVAMYFGARFGFDKADRKSLFSMINDLPTIFEVVAGKAKKQGKEKSSVSNHDNNKSKSNSKRGSESQEKYSKSMEPKNESALEKDDEHGDGLCGACGENYAHVADADEFWIGCDICERWYHGKCVRITPAKAQNIKEYKCPSCSNKRVRQ
169
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu10g03114
169
PANTHER
CPG BINDING PROTEIN
1
169
IPR045104
GO:0006355|GO:0042393
Vimu10g03114
169
SUPERFAMILY
FYVE/PHD zinc finger
104
166
IPR011011
-
Vimu10g03114
169
CDD
PHD_AL_plant
111
165
IPR044104
-
Vimu10g03114
169
MobiDBLite
consensus disorder prediction
60
105
-
-
Vimu10g03114
169
FunFam
PHD finger alfin-like protein
104
164
-
-
Vimu10g03114
169
Pfam
Alfin
1
54
IPR021998
GO:0006355|GO:0042393
Vimu10g03114
169
ProSitePatterns
Zinc finger PHD-type signature.
112
162
IPR019786
-
Vimu10g03114
169
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
102
164
IPR013083
-
Vimu10g03114
169
ProSiteProfiles
Zinc finger PHD-type profile.
109
165
IPR019787
-
Vimu10g03114
169
SMART
PHD_3
111
163
IPR001965
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu10g03114
Vimu-Chr10
41875788
41878798
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu10g03114
1
168
Alfin-like Transcription Factor Family
AT3G42790
60.234
5.14e-67
202
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Vimu10g03114
PHD
8.5e-11
CL0390
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu10g03114
K26274
-
mnt:21387296
254.218
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vimu10g03114
10
41875788
41878798
Vimu10g03114
10
41875788
41878798
ECH
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