Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03098 ATGTTACGAGATATGGTACAGAAGAAAGAACAGGCAATGAAAGAGAATAAAGTGAAAGAGCATGATTTATTAAGTTCACTGCTACAGTATAAGGAAGAAAGTGATTCTTTAACAACAGAGGGTGTGATTGAAGAATGCAAGTTGTTTTACTTTGCCGGGCAAGTGACCACGGCCAACTTGCTTGCATGGACTATGATTGTTTTATCTATGCATCAAGATTGGCAAGAGAAGGCAAGAACAGAGGTGTTGAAGATTTTTGGCAAAAAAACACTTGACTATGAAGACATTAATCACCTCAAGATTGTGTCAATGATACTGTATGAAGTTTTGAGATTATACCCTCCTCTAGTAAACATTAACAAATACAGTTGGTGTGAAACAAGAGTGGGAGACATGTCGATTCCAGCAGGGGTTGAAGTGTGTTTACCTTTGTTATTTCTTCATTATGACAGTGAGTATTGGGATAAGCCTGAAGAGTTCAACCCAGGTAGATTCAGTGAAGGGATTTCAAAAGCTTCAAAGGATCATATCGCTTTCTATCCATTCGGTTGGGGCTCAAGAATTTGTCCTGGCCAAAATTTTGCCTTCTTAGAAGCAAGAATGGCTCTGGCTTTCATTCTTCAACACTTCTCTTTTCAACTCTCACCCACTTATGCTCATGCTCCAGCAACTCCTACTATCACTCTCACGCCACAGCATGGTGCTCCCATTATCATTCGTCGCACTTAG 729 0.4005 MLRDMVQKKEQAMKENKVKEHDLLSSLLQYKEESDSLTTEGVIEECKLFYFAGQVTTANLLAWTMIVLSMHQDWQEKARTEVLKIFGKKTLDYEDINHLKIVSMILYEVLRLYPPLVNINKYSWCETRVGDMSIPAGVEVCLPLLFLHYDSEYWDKPEEFNPGRFSEGISKASKDHIAFYPFGWGSRICPGQNFAFLEARMALAFILQHFSFQLSPTYAHAPATPTITLTPQHGAPIIIRRT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03098 242 PRINTS P450 superfamily signature 189 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS P450 superfamily signature 180 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS P450 superfamily signature 104 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS P450 superfamily signature 52 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 Pfam Cytochrome P450 2 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 SUPERFAMILY Cytochrome P450 2 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 182 191 IPR017972 GO:0005506|GO:0016705
Vimu10g03098 242 Gene3D Cytochrome P450 1 241 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS E-class P450 group I signature 41 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS E-class P450 group I signature 179 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS E-class P450 group I signature 189 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS E-class P450 group I signature 61 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PRINTS E-class P450 group I signature 143 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu10g03098 242 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03098 Vimu-Chr10 41806323 41809216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03098 1 241 Cytochrome P450 AT3G14680 50.204 1.15e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03098 - - aip:107623710 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03098 10 41806323 41809216 Vimu10g03098 10 41806323 41809216 ECH