Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g03084 | ATGCCTGAGCCAATCATGAATATGCGCCATGGCACTAAGGTTTGGGTTCACGACAGGGATTTAGCGTGGATTCCAGCTGAAGTAGTCGAATCTTCAGCAAAGAATGTTACCGTTGCCACTGCTTCTGGCCTTAAGGTTGTTGCTCTTTCCGAGAACGTGTTTCCCAGGGATGCGGACGAAGATGAGCATGGAGGAGTGGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTCCGCAGAAGATATGCGCTGAATGATATCTATACTTATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATCTGTATGATATTCATATGATGGAGCAGTATAAGGGAACTCCATTTGGTGAGCTTAGTCCACATGTATATGCTGTTGCTGATGCTTCTTATAGAGCTATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTTAGTGGTGAAAGTGGTGCAGGGAAAACAGAGACTACAAAATTGATTATGCAATATCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGACAGAACTGTTGAACAACAAGTTCTTGAATCGAATCCACTCTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTGCTAGAAAGATCACGAGTAGTACAGATAACAGATCCAGAACGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGTAGAGAAGTATAAGTTGGGACATCCCAGTCACTTCCACTATTTGAATCAAAGTAAAGTCTACGAATTAGATGGCATAAATAGTGCTGAAGAGTACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTGGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGTAAAGAGCATGACTCATCGGTACTAAAAGATGATAAATCAAGATTTCATTTACAGATGGCTGCCGATCTTTTCAGGTGTGATTTGAATCTACTGCTTGCAACATTATGTACGCGTTCAATACAAACCCGAGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGCCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGTTCTGTGGGCCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAACTTTGCAAATGAAAAGCTTCAGCAACATTTTAATCAGATCATTGCTTGTGGAAGAAGTTCACTCATCATTATCATTGTGGAAGGTGTCGTGGTGGTGGTATTCAGAGGAGTGCATGTGGCTGCTGTAGCTCATGTTTTCAAGATGGAGCAGGAGGAATACACCAAAGAAGAAATTAACTGGAGCTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGGTTTTAGCTCAGTCATTTCTTTTGATGGAGAAACCCATTGGGATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCATGAAACATTCTCTACCAAGTTGTTTAAACACTTCCTGTCACACCCTCGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGAGACATTCTTAGACAAAAATCGTGATTATGTAGTTGTAGAACATTGTAATCTATTATCCTCTTCAAAGTTGCCATTTGTGTCGGCTCTTTTTCCTTTGTTAACAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTGCAAGCACTCATGGAAACACTTAACACAACAGAACCTCATTACATTCGTTGTGTCAAGCCAAGTTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGTTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGTAGGATTTACTCAGAGTTTGTAGACCGCTATGGATTAATAGCTCCCGAATTTATGGATGGAAGTTATGATGATAAAGCTGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATATTCAGTTAGGTAGGACCAAGGTGTTTCTGAGGGCCGGTCAAATTTGCATTTTAGACTCTAGGCGTGCAGAAGTTTTGGACAATGCTGCAAAATGTATTCAGCGTCAGTTGCGGATGTTTATAGCTCGCAGGGATTTCATCTCAATTCGTGCTGCTACACTTTCTCTTCAAGCGTGCTGCAGGGGTTGCATTAGCCGAAAGATATATGCTTCTAAGCGGGAGACAGCAGCAGCTATTTCCATTCAAAAATACACCCGTATGTGTCTGATGAGACATGCTTATGTGAAATTGTGTTATTCTGCTATTATTGTACAATCCAATGTTCGTGGTTTCACAACTCGACAAAGGTTCTTGCATAGAAAGGAGCACAAAGCTGTTACTTACATTCAGGCCTATTGGAGGATGTGCAAGGTTCGATCTGCATTCCTAAAACATCAAAATTCAATTGTAGCAATGCAATGCCTTTGGCGATGCAGACAAGCAAAAAGAGAGCTTCGAAGACTTAAGCAAGAGGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTAGAGAAAAAAATTAGGATTTCTAATGAAGAGGTTAAGCATGTTGAGATTTCCAAATTACAGAAGATGGTGGAGGCTCTGAATGTTGAATTAGATGTAGCTAAACTTGCAACAATTAATGAGTGCAACAGAAATGCAGTTTTGCAAAATCAGTTGCAATTATCAGTAAAGGAAAAATCTTCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCAAAAGGAAAATGCTCAATTAAAGGGTTCATTGGAGGCTTTTGAAAAGAAGAGCATGGCTTTGGAGCTTGAGCTTGTTGGTGCTCGGAAAGACCATGAAAAAACCATTCTGAAAATGAGGGAGTTTGAACACAAGTGTTCTCAACTTGGGCAAGATGTGAAAAGCCTCCAGGAAAAGCTATTTAGTTTAGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCTTAACTGTATCTCCTAAGAGTAACTATCGAGGTTTAACGAAGTCATTTTCAGAAAAACAACCAAATGCAGTAGCTCCCCACACTGATCAAAAGCCTATATTTGAATCACCCACACCTACAAAACTTATTTCCTCTTTTACACATGGAAGTTTCTCAGACTCTCGTAGATCAAAATTAACGGCAGAGAAGCACCAGGATAACAATGAACTCCTTTCTAGGTGTATTAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTTGTATCATATACAAATGTCTTCATCATTGGCATGCCTTTGAATCTGAGCGCACTGCCATATTTGATTACATTGTTGATGGAATTAATGATGTCCTAAAGGTTAGAGACGATGACATTATCTTGCCATATTGGCTGTCTAATACGTCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATTCAAATGGCTTTTTAACAGCCACTGCTCAACGTTATGCCAGATCATCTGGCTTGACCAGCCGAATTGGGCATAAGCTGAGGTCTCCATTGAAGCTTATTGGATATGATGATAGTACAGTACATGTGGAAGCAAGATATCCAGCTATTCTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGGCATCATGTATTCAGGTGGTCCTAGCTGATACTTTTGGGGATTCAAACAATGCACCTAAAACAGGTCGGATGCTAGGTGGAAAATCATCAAAGTCTCCTGGTGGGCATCCTCCACAATCACCTGTTGCTCAATGGGACAATATCATCAAATTTTTGGATTCACTCATGAGCAGAATGCGTGTAAATCATGTACCATCCTTTTTCATCCGCAAGCTGGTTACTCAGGTTTTTTCCTTCATCAACATTACACTCTTCAATAGCCTTCTGTTGCGACGTGAATGTTGCACTTTCTCAAATGGTGAATATGTAAAGTCTGGGCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCACGAACTGAACTATATAAGGCAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGAAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACAGTGAGGCAAATTTATCGGATCTGTACTATGTACTGGGACGACAAATATGCAACCCAAAGTGTGTCCAACGAGGCAAGTTGTGTAGTTAATGAAATGAGGGAAATTGTGAGCAGGGACAATCAGAGTTTGACAACTAATTCTTTCTTGTTGGACGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACTGATGATATCGATCCCCCAGCATTTTTGTGCGAATATCCCTGTGCCCAGTTTCTTACTTTACATGAGAAATAA | 4737 | 0.3998 | MPEPIMNMRHGTKVWVHDRDLAWIPAEVVESSAKNVTVATASGLKVVALSENVFPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGTPFGELSPHVYAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGINSAEEYMKTRRAMDIVGISHEDQEAIFCTLAAILHLGNIEFSPGKEHDSSVLKDDKSRFHLQMAADLFRCDLNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQIIACGRSSLIIIIVEGVVVVVFRGVHVAAVAHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKVLAQSFLLMEKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTETFLDKNRDYVVVEHCNLLSSSKLPFVSALFPLLTEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPSSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRYGLIAPEFMDGSYDDKAVTLKILQKLKLENIQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRQLRMFIARRDFISIRAATLSLQACCRGCISRKIYASKRETAAAISIQKYTRMCLMRHAYVKLCYSAIIVQSNVRGFTTRQRFLHRKEHKAVTYIQAYWRMCKVRSAFLKHQNSIVAMQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRISNEEVKHVEISKLQKMVEALNVELDVAKLATINECNRNAVLQNQLQLSVKEKSSLERELVAMDEVQKENAQLKGSLEAFEKKSMALELELVGARKDHEKTILKMREFEHKCSQLGQDVKSLQEKLFSLEDENHVLRQKALTVSPKSNYRGLTKSFSEKQPNAVAPHTDQKPIFESPTPTKLISSFTHGSFSDSRRSKLTAEKHQDNNELLSRCIKEDLGFKNGKPLAACIIYKCLHHWHAFESERTAIFDYIVDGINDVLKVRDDDIILPYWLSNTSALLCLLQRNLHSNGFLTATAQRYARSSGLTSRIGHKLRSPLKLIGYDDSTVHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLASCIQVVLADTFGDSNNAPKTGRMLGGKSSKSPGGHPPQSPVAQWDNIIKFLDSLMSRMRVNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRICTMYWDDKYATQSVSNEASCVVNEMREIVSRDNQSLTTNSFLLDDDMSIPFSAEDIDMAIPAINTDDIDPPAFLCEYPCAQFLTLHEK | 1578 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g03084 | 1578 | ProSiteProfiles | Myosin motor domain profile. | 64 | 775 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vimu10g03084 | 1578 | ProSiteProfiles | IQ motif profile. | 897 | 926 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 896 | 918 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 825 | 847 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 777 | 799 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 800 | 822 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 848 | 870 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | SMART | iq_5 | 873 | 895 | IPR000048 | GO:0005515 | |
| Vimu10g03084 | 1578 | Coils | Coil | 966 | 986 | - | - | |
| Vimu10g03084 | 1578 | ProSiteProfiles | IQ motif profile. | 801 | 830 | IPR000048 | GO:0005515 |
Showing 1 to 10 of 50 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g03084 | K10357 | - | gmx:100796413 | 2740.3 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu10g03084 | 10 | 41685380 | 41708354 | Vimu10g03084 | 10 | 41685380 | 41708354 | ECH | |
| Vimu1g02800 | 1 | 40299803 | 40306945 | Vimu10g03084 | 10 | 41685380 | 41708354 | PCT | |
| Vimu10g03084 | 10 | 41685380 | 41708354 | Vimu1g02797 | 1 | 40274609 | 40277934 | PCT |
Showing 1 to 3 of 3 entries