Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03078 ATGATGCACATGACCTTTTACTGGAGCCGGAAGGTGAATCTCCTGATCGATTCCTGGCAGACCCAGGATTGGACCGATTATCTTCTCACCCTTCTTGCATGTCTCATCGTTTCCGCTTTCTACCAGTTCATTGAGAATCGCAGAATTCGCCTCAAGCTCATCGGGGCCGGAAAGCCCTTCCCGTCGGAGATCCAGACCCCTCTGTTGCAGCGGAAGCTCACCGGAAACCGTGCCAAGTTGGGCGTGAAGGTAGCTGGGGCAATTCTCTTTGGGCTGAGCTCGGCCATAGGGTATTTATTGATGTTATCGGTTATGTCCTTCAACGGAGGGGTTTTTGTGGCCATCGTCGTGGGTCTCGTTGTTGGTTACTTTTTCTTCAGGAACGAGGGTGAAGATTCCATTACAGTAGACACTTCTTGCGCCTGTGCTTAA 432 0.5116 MMHMTFYWSRKVNLLIDSWQTQDWTDYLLTLLACLIVSAFYQFIENRRIRLKLIGAGKPFPSEIQTPLLQRKLTGNRAKLGVKVAGAILFGLSSAIGYLLMLSVMSFNGGVFVAIVVGLVVGYFFFRNEGEDSITVDTSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03078 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu10g03078 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03078 Vimu-Chr10 41658670 41659101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03078 1 143 Inorganic Solute Cotransporters AT5G20650 49.669 2.32e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03078 K14686 - gmx:100805457 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03078 10 41658670 41659101 Vimu11g03088 11 50376045 50379183 ECH
Vimu10g03078 10 41658670 41659101 Vimu10g03078 10 41658670 41659101 ECH