Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03077 ATGGCAGGGACAGACAAGACTGCAACAGACAAGACTGCGACCGTGATGGAAGCGGAGGTGCGCTCGGTGACGTGCTACTGTTGTGGGCTTACTGAGGATTGCACGGCGCTTTACATTGACCGCGTGAGGGAGAGGTACCAGGGTCGTTGGATTTGTGGGCTGTGTGCTGAAGCAGTGAAGGAAGAGGGTTTGAAGTTGAAAGATGTTGAAGTTGACACAGATGAAGCACTGAAGCGCCACATGAAGTTCAGATCTTTTGCTTCTAGTCCTCCCAAAAAACCCACCCATGACCTGATTCTTGCAATGAAACACCTTCTTTTTCGATCTTTGGATTCTCCCAGGAAGGATTCTTTGAACTGTTCGCCACTGGCTAGTTCCCACAAATGTTTTTCACCTGGATCCTCGAAGGGAGAGTCACAAGAGATAATCACCAGGGAGTAG 441 0.4943 MAGTDKTATDKTATVMEAEVRSVTCYCCGLTEDCTALYIDRVRERYQGRWICGLCAEAVKEEGLKLKDVEVDTDEALKRHMKFRSFASSPPKKPTHDLILAMKHLLFRSLDSPRKDSLNCSPLASSHKCFSPGSSKGESQEIITRE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03077 146 MobiDBLite consensus disorder prediction 127 146 - -
Vimu10g03077 146 PANTHER OS01G0745000 PROTEIN 9 134 IPR012876 -
Vimu10g03077 146 Pfam Protein of unknown function (DUF1677) 20 108 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03077 Vimu-Chr10 41654891 41655331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03077 - - gmx:100817156 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03077 10 41654891 41655331 Vimu10g03077 10 41654891 41655331 ECH
Vimu10g03077 10 41654891 41655331 Vimu1g02695 1 38902548 38903841 ECH
Vimu11g03088 11 50376045 50379183 Vimu10g03077 10 41654891 41655331 ECH