Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03071 ATGAAGACACCCGTAAGTCTGATCCAAATCCCCAGCAAGGAAGAACTCAGGCAGAAAAACCTTTTCAGTGTCAGTGACTGCAAGATCTATTGGCAAAGCAATGGAGACTACCTTGCTGTTAATGTTGAACGCTATACAAAAACAAAAAAAAGCACATACACAGGCTTTGAGCTTTTTCGCATAAAAGAGAGAGACATACCAATTGAAGTATTGGAGCTTGAGAATAAGAATGATAAGATCATTGCATTTGCTTGGGAGCCAAAAGGCCATAGGTTTGCGGTTATTCATGGTGATAACCCTAAACCTGATGTAAGCATTTACTCCATGCGTACTGGTCAGAATAGCCGAGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAAGCAAATGCTCTGTTTTGGTCACCTGCAGGTCGCTACATTGTACTGGCTGGGCTGAAAGGATTCAATGGGCAGTTAGAATTTTACAATGTTGATGAACTTGAAACCATGGCTACTGCTGAACATTTTATGGCAACAGATATTGAATGGGATCCAACTGGAAGGTATATGGTTCATCTAAATGCTTAA 567 0.4092 MKTPVSLIQIPSKEELRQKNLFSVSDCKIYWQSNGDYLAVNVERYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDVSIYSMRTGQNSRVSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYMVHLNA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03071 188 Pfam Eukaryotic translation initiation factor eIF2A 19 184 IPR013979 -
Vimu10g03071 188 Gene3D - 1 186 IPR015943 GO:0005515
Vimu10g03071 188 SUPERFAMILY DPP6 N-terminal domain-like 27 182 - -
Vimu10g03071 188 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 4 184 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Vimu10g03071 188 FunFam Eukaryotic translation initiation factor 3 subunit B 24 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03071 5 184 Eukaryotic Initiation Factors Gene Family AT5G27640 86.188 1.01e-112 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03071 K03253 - gmx:100817394 363.999