Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g03060 | ATGGTCTGCGAGATGGAGAATGATTGCATAGAGGACATGGACATTGAGGCCCTTCCTTCAATGTGGCCTGAAGATATTGGTACTGATGTTGGAAAGCAGTTTAATATAGAAAAGCCTGGAAGGGACCAAGACATGTTAGAGGAGGTTACTATCATAGAGGAGCCAACTATAGTTGATTTCAAGCGACTCATGGAGCTTACAAATTTTACAGAAAAGGGGTCTTCTCAGTTGGCATACCTAATGAAACACTGGGAGTACAAACAGGCCAATGTTGTGCGTCTTCTCAGAGAAGAACTCGACAACCTTAGCAAGCAAAGGCAGGATGTTGAACTCAGGAAATTGGAGATATTGGAAGAACATCGATTTGTGGAAGAAAGATATGGGGGTGATAAACGCCCAGTTTCTATTTTGGATGACGTTTATGATGGTATATGGCATGATGTACCTTGCAGGAAAAGTGATGCTGTGGTTCAAAACAAGAAGAACGAGATTGATGCTGAGTATGGCACTGTCATGTACTGGAAACAGCGAGCCTTGCAATTAGAGAAGCAGCTGGAGGCAAGTATCCAAAGGGAACAGATACTTGAAGAGAAGTTGCAAGAAAGTATAGCAAACATTGAGAGGCAGTCCTCACCGGTGGAAGAACTGTCCCAGATCCTAAAAAGGGCAGACAATTTCTTGCATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCACCAGGACAAAGATTTGCGCTATTGTTTTATATACAATCATTTCCCAAGTTTACAAGAAGAGGACATCATAGGAAAAACGGATGTTGAAATATTCACGGGAGCTGGTGTTAAGGAATCTCAAGAGTTTAAGAGAGAAGTTTTGGAAAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTGTTTGGATCAAAAACATTTTTGATATATGTAGAACCCGTGTTTAGCAAAGCTGGGGAGACAATTGGAATAAATTACATGGGAATGGATATAACAGATCAGGTGAGAAAAAGGGAAAGGATGGCAAAGATTCGGGAAGAGATTGCTGTCCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAAACAATGCGAGCAAAACAAATGCTGGCAACAATGTCGCACGAGATAAGGTCTCCTTTGTCTGGGGTTGTTAGCATGGCTGAAGTTCTTTCTAACACAAAACTTGACTGGGAGCAAAGACAACTCTTGGATGTCATGCTATCTTCTGGAGATTTGGTTCTTCAACTTATAAATGACATCCTTGATCTTTCCAAGGTTGAGTCAGGTTGCACTGATATTTTAAAATTTGATCATTCTCCAAAATCCCTGCTCTATGTAGGAGTCATGAAATTGGAAGCTACTAAATTCCGGCCAAGAGAGGTAGTCAAACATGTACTCCAGACTGCTGCAGTTTCGTTGCAAAAAGTACTAACCTTGGAAGGACATGTAACTGATGATGTACCTGTTGAGGTCGTTGGTGATGTTTTAAGGATGCGGCAAATTCTCACAAATTTAATTAGCAATGCCGTGAAGTTCACCCATGAAGGCAAAATTGGAATAAACCTTTACGTCGTGCCAGAACCTTCTTTTGCAAAGGCAGAATGCATACAAAAGATGACTTCAGAGCATTCAACTATTTCAGCGCCTCAAAGTGGCAGCGACAGAAAACCTCTTGGTGATGATTGTCCCAGCCAAAACCATGCATTCAATGACGAATGTAGATCACCGGTTAAAAGCGAATGCTCAATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGGAACAACAGTGTGGATACGTTGTGATGTATATGACACGGGCATTGGAATACCAGAAGATGCTATACCAACCTTGTTTAAAAGGTACATGCAAGTCAGTGCAGACCATTCTCGAAAGTACGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAGCTGGTTGAGTTGATGGGGGGTCGTCTAACCGTGTCTAGCAAAGAACATTATGGTTCTACCTTCACTTTCATACTTCCATACAAGGTTTCAATTGCTTGTGATAATTCTGATGACCAGGATGAGCTGTCTGATGTAGAGAATAATGATGCTGCATCTGATGATACAATAGAGAGTTTCTTCCAATTCCAGCCACGCACTTTGGGCTCTCTATTCTCATCTAATGGATGTAGCAGGACACAGATGTTATTACCAAACAAAATTGGATATAGAAGCTCCCATAAACTTGGTGGATTTTCTGACAGTTTATATTCAATCCTCTCTAATGATATCATGTCAAAAGAGACATGCTCAGTTGATGATTCATCTTCAGTTGTTGATGGTCCAGAGATGTCTGAATCGGCCAGTTCATCTGGTCACAGCTCAGAAACAAAGAACAGAAGTTCAGTTAGCAGAGATAAACTCCAGCAAGATAAGGCTCATACCTGGTCCTTGAATGGTTATGCAGATTCCTCTGAAGCAACTGTGGCAAGTGGAGAAATGGCTGCAGCAACAAAGTCATGTGAATCCCAACAAACATGTCAGGGTCACGGGAAGACAAACACAACTGTCCAATCAAGCAACGGTACACCAGGAGTAACCAAATCCTCATCATGGCCTAAGATCCTTCTTGTTGAAGATACCAAGATTAATATCATGGTGACACAGACCATGATGAAGCAATTAGGCCATAGCATAGATGTTGTGAATAATGGAGCGGAAGCTGTACGTGCAGTTCAGCGCTGCACTTATGACCTGATTCTGATGGATGTCTGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAACTGATTCGATCTTTTGAGGAAACAGGCAATTGGGATGCTGCAAGAAATGCAGGAATCGAGCAAAGTCTTCCAGATTCAGATTATGAATGTTCTGAACCTTCTAAAAAGCGGATTCCCATTGTTGCTATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTATGCAAATGGAATGGATTCGTTTGTATCAAAACCTGTAACTCTCCAGAAACTGAAAGAGTGTATTGAACAGTACCTGAGGTGA | 3057 | 0.4161 | MVCEMENDCIEDMDIEALPSMWPEDIGTDVGKQFNIEKPGRDQDMLEEVTIIEEPTIVDFKRLMELTNFTEKGSSQLAYLMKHWEYKQANVVRLLREELDNLSKQRQDVELRKLEILEEHRFVEERYGGDKRPVSILDDVYDGIWHDVPCRKSDAVVQNKKNEIDAEYGTVMYWKQRALQLEKQLEASIQREQILEEKLQESIANIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKDLRYCFIYNHFPSLQEEDIIGKTDVEIFTGAGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDITDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEVLSNTKLDWEQRQLLDVMLSSGDLVLQLINDILDLSKVESGCTDILKFDHSPKSLLYVGVMKLEATKFRPREVVKHVLQTAAVSLQKVLTLEGHVTDDVPVEVVGDVLRMRQILTNLISNAVKFTHEGKIGINLYVVPEPSFAKAECIQKMTSEHSTISAPQSGSDRKPLGDDCPSQNHAFNDECRSPVKSECSMNGDTEEQPYSAGTTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSADHSRKYGGTGLGLAICKQLVELMGGRLTVSSKEHYGSTFTFILPYKVSIACDNSDDQDELSDVENNDAASDDTIESFFQFQPRTLGSLFSSNGCSRTQMLLPNKIGYRSSHKLGGFSDSLYSILSNDIMSKETCSVDDSSSVVDGPEMSESASSSGHSSETKNRSSVSRDKLQQDKAHTWSLNGYADSSEATVASGEMAAATKSCESQQTCQGHGKTNTTVQSSNGTPGVTKSSSWPKILLVEDTKINIMVTQTMMKQLGHSIDVVNNGAEAVRAVQRCTYDLILMDVCMPVMNGLEATKLIRSFEETGNWDAARNAGIEQSLPDSDYECSEPSKKRIPIVAMTANALSESAEECYANGMDSFVSKPVTLQKLKECIEQYLR | 1018 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g03060 | 1018 | SMART | REC_2 | 873 | 1013 | IPR001789 | GO:0000160 | |
| Vimu10g03060 | 1018 | SMART | HisKA_10 | 372 | 437 | IPR003661 | GO:0000155|GO:0007165 | |
| Vimu10g03060 | 1018 | Gene3D | - | 360 | 438 | - | - | |
| Vimu10g03060 | 1018 | Coils | Coil | 92 | 119 | - | - | |
| Vimu10g03060 | 1018 | FunFam | Putative histidine kinase 5 | 360 | 437 | - | - | |
| Vimu10g03060 | 1018 | ProSiteProfiles | Histidine kinase domain profile. | 379 | 683 | IPR005467 | - | |
| Vimu10g03060 | 1018 | CDD | HATPase_EvgS-ArcB-TorS-like | 506 | 680 | - | - | |
| Vimu10g03060 | 1018 | PRINTS | Bacterial sensor protein C-terminal signature | 667 | 680 | IPR004358 | GO:0016310|GO:0016772 | |
| Vimu10g03060 | 1018 | PRINTS | Bacterial sensor protein C-terminal signature | 643 | 661 | IPR004358 | GO:0016310|GO:0016772 | |
| Vimu10g03060 | 1018 | PRINTS | Bacterial sensor protein C-terminal signature | 608 | 622 | IPR004358 | GO:0016310|GO:0016772 |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g03060 | - | - | gmx:100819520 | 1689.47 |
Showing 1 to 1 of 1 entries