Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03042 ATGCTATCTTCTAACACTCAACGGCTAGTTTCTCTCTTCTTCATCACCTTAAATACAACACTCCTCTCACTACTGCATACCCCCACTCGTGCTTCTGAGAGTAAGAAAGGTAAAATCTCTTTGGTTCTCAAAAAGGAAAAGACCATGGCTAGTTCCTCAAGAGCCGTCTCTGCTTCCCTTTTGTTCTTTTTCCTTCTTCTTGGATTCTCAGCAGCTAAGGAACTATTAGTTGGCGGAAAGATTGATGCTTGGAAGATTCCATCTTCAGAAGTAGATTCTCTCAATCAATGGGCCGAAAAGTCTCGTTTCAGAGTTGGCGACTATCTGGTGTGGAAATTTGAAAGTGGGAAGGACTCAGTGTTGGAAGTAACAAGAGAGGAATATGGTAATTGCAGCAGCTCCAACCCAATCAAAGAGTACAGTGATGGGAATACTAAGGTGATGCTAGAACGTCCTGGGCCATTCTATTTCATCAGTGGAGCAAAGGGGCACTGTGAGAAGGGCCAAAAGTTGGTTGTGGTTGTCATTTCTCCAAAGCACACATTCCGTGCAATTTCTCCGGCACCTTCTCCGGCGGAGTTTGAGGCTCCGGCTGTTGCTCCTACTAGTACTGCTACAACCTTGCAAGTTGCTCTTCTAACCTCAACTCTCCTAGTGTTCGCCATGACTTTGGTGGTCACGTTCTTTTAA 690 0.4507 MLSSNTQRLVSLFFITLNTTLLSLLHTPTRASESKKGKISLVLKKEKTMASSSRAVSASLLFFFLLLGFSAAKELLVGGKIDAWKIPSSEVDSLNQWAEKSRFRVGDYLVWKFESGKDSVLEVTREEYGNCSSSNPIKEYSDGNTKVMLERPGPFYFISGAKGHCEKGQKLVVVVISPKHTFRAISPAPSPAEFEAPAVAPTSTATTLQVALLTSTLLVFAMTLVVTFF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03042 229 Gene3D - 71 180 IPR008972 -
Vimu10g03042 229 Pfam Plastocyanin-like domain 84 169 IPR003245 GO:0009055
Vimu10g03042 229 FunFam Early nodulin-like protein 1 72 180 - -
Vimu10g03042 229 SUPERFAMILY Cupredoxins 72 176 IPR008972 -
Vimu10g03042 229 PANTHER BLUE COPPER PROTEIN 74 196 IPR039391 GO:0009055
Vimu10g03042 229 CDD OsENODL1_like 73 176 IPR041846 -
Vimu10g03042 229 ProSiteProfiles Phytocyanin domain profile. 73 177 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03042 Vimu-Chr10 41335553 41336524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03042 59 211 Phytocyanin Superfamily AT2G25060 57.792 1.38e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03042 - - gmx:100305551 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03042 10 41335553 41336524 Vimu10g03042 10 41335553 41336524 ECH
Vimu1g02754 1 39793748 39794701 Vimu10g03042 10 41335553 41336524 PCT