Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02973 ATGTTTGCAGAAGAGAATGGCCTCAAGGGAGACCCCAGACTTCAAGCCATTTCTCAAGCCATCAGAGTCGTTCCTCACTTCCCTAAGCATGGAATAATGTTCCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGGGGATTCATGTTTGGTCCTTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTCCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTGATCTCAGAAAAATATGCTCTAGAATATGGGACAGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAACGGGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTCAAGTAGTGGAATGTGCTTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGGCTCATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTAAAGCAGATAAATGTTATTAA 576 0.467 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAQVVECACVIGVPDVKGQCRLIGKPLYVLVEPRKADKCY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02973 191 Gene3D - 6 184 IPR029057 -
Vimu10g02973 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Vimu10g02973 191 CDD PRTases_typeI 51 183 IPR000836 -
Vimu10g02973 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Vimu10g02973 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vimu10g02973 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vimu10g02973 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Vimu10g02973 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02973 Vimu-Chr10 40680374 40683049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02973 11 183 PRT Gene Family AT1G27450 69.942 5.33e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02973 K00759 - gmx:100499904 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02973 10 40680374 40683049 Vimu10g02973 10 40680374 40683049 ECH