Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02962 ATGAGATTAGGTGTGAATAAGCACGTTGTGCGGTGCTCGATCGGCACCGTTTCAGGCGAGTCCAAAACCCATTTTCCCGCCAAATCCCAACTTTCGTCTTTCTCAGCTGTCAAGTTCCGCCCTGGCGATGGTTCTTCAGATTTAGCGGTTTCTAGTAGCAGCAGGAGAGAGCTGATATGCTTAGTCACGTGGCCATGTCTTCTTCCTCTCATAGGTTGTCTCCCAGCCAACGCCTTGCAGGCAGGTGCAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTGTTGTCTAAGGTAAAGGCAGCTGGGGTGCTTCGATTGGTTTTCCACGATGCTGGAACCTTTGACATCAATGACAATTCAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCCGAAAATGCCGGCCTGAAAAAATCAGTACTGCAAAAAGCTAAGACTCAGATAGATGCCATCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGCAGACTAGATGCACTGGTGCCTGATCCAGAAGGGCGACTCCCCGAGGAATCTCTTAATGCTTCTGGTTTGAAGAAATGTTTCCAGAGCAAAGGCTTATCAACACAAGAACTCGTGGCATTATCCGGAGCCCATACTATTGGAAGCAAAGGTTTTGGAAGCCCAAATTCTTTTGATAATTCATATTATAAGGTCCTTTTGGAAAAGCCATGGACATCTTCGGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCCCTTGTTGAGGACGATGAATGCTTAAGATGGATTAAAAAATACGCCGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTTAGGTGGAAAAACATGTAA 948 0.4568 MRLGVNKHVVRCSIGTVSGESKTHFPAKSQLSSFSAVKFRPGDGSSDLAVSSSSRRELICLVTWPCLLPLIGCLPANALQAGAKEYLLIKEEVRKVLSKVKAAGVLRLVFHDAGTFDINDNSGGMNGSIVYELERPENAGLKKSVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDALVPDPEGRLPEESLNASGLKKCFQSKGLSTQELVALSGAHTIGSKGFGSPNSFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRWKNM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02962 315 ProSiteProfiles Plant heme peroxidase family profile. 102 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 Gene3D - 90 309 - -
Vimu10g02962 315 ProSitePatterns Peroxidases active site signature. 102 113 IPR019794 GO:0004601
Vimu10g02962 315 Gene3D Peroxidase, domain 2 200 302 - -
Vimu10g02962 315 Pfam Peroxidase 91 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Haem peroxidase superfamily signature 222 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Haem peroxidase superfamily signature 159 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Haem peroxidase superfamily signature 102 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Haem peroxidase superfamily signature 177 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 85 313 IPR044831 GO:0004601|GO:0034599
Vimu10g02962 315 FunFam Adenylate/guanylate cyclase 200 302 - -
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 177 189 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 216 237 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 198 215 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 120 130 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 158 176 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 102 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 PRINTS Plant ascorbate peroxidase signature 286 310 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 SUPERFAMILY Heme-dependent peroxidases 101 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu10g02962 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 222 232 IPR019793 -
Vimu10g02962 315 FunFam L-ascorbate peroxidase 92 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02962 Vimu-Chr10 40596454 40600507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02962 87 311 Peroxidase AT4G31760 30.072 2.19e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02962 K00434 - gmx:100792735 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02962 10 40596454 40600507 Vimu10g02962 10 40596454 40600507 ECH