Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02930 ATGATGATGCACATGACCTTTTACTGGAGCCGGAAGGTGAATCTACTGATCGTTTCCTGGCAGACCCAGGATTGGACCGATTATCTTCTCACCCTTCTTGCATGCCTCATCGTTTCGGCTTTCTACCAGTTCATTGAGAATCGCAGAATTCGCCTCAAGCTCATCGGCACCGGAAAGCCCTTCCCGTCAGAGATCCAGACCCCTCTGTTGCAGCAGAAGCTCACCGGAAACGGGGCCAAGTTGGGTGTGAAGGTCGCCGGGGCGATTCTCTTTGGGCTGAGCTCGGCCATAGGGTATTTGTTGATGTTATCGGTTATGTCCTTCAATGGAGGGGTATTTGTGGCCATAATAGTGGGTCTAACTGTTGGTTACTTTTTCTTCAGGAACGAGGGTGAAGATTCCATTTTAGTAGACACTTCTTGCGCCTGTGCATAA 435 0.4989 MMMHMTFYWSRKVNLLIVSWQTQDWTDYLLTLLACLIVSAFYQFIENRRIRLKLIGTGKPFPSEIQTPLLQQKLTGNGAKLGVKVAGAILFGLSSAIGYLLMLSVMSFNGGVFVAIIVGLTVGYFFFRNEGEDSILVDTSCACA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02930 144 Pfam Ctr copper transporter family 5 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu10g02930 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02930 Vimu-Chr10 40346283 40347117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02930 2 144 Inorganic Solute Cotransporters AT5G20650 47.260 7.74e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02930 K14686 - gmx:100805457 256.529