Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02917 ATGGAAGAAATTGAAGGGGTGGATTGTTGCAGTAAAAGTGAAAGCAGGAGCTCTAGTGGGACTCGACCTCCCAATCCCAACCCACCTTCACATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCATGAAAACAAATTTGGCTGATGTATCTGAGCCAGGCGATGTTACCGAAGATTACCAATCTGATTTCTTTCCAACGCTTCGTTCTGGAGCTTGCGCTGATATTGGATTTCGGTCAAGTATGGAAGATGTATATGTTTGTGTTGACAATTTTATGCACGATTATGGACTCAAGAATTGTACAGATGGACCCAGTGCTTTCTATGGGGTGTTTGATGGACATGGGGGAAAGCATGCTGCTGACTTTGCTTGCCAGCATCTGCCAAAGTTTATTCTCGATGACGAAGATTTCCCTGGAGACATTGAAAGGATAGTTGCTTCGGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGGTGCACTTGCATCAGGCACCACTGCATTAGCTACTCTTGTTATAGGAAGGTTGTTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGGAAAGCAATTGAAATGTCAAGAGATCATAAACCGAGTTGCAACAAAGAAAGGAAGCGAATAGAGGCTTCTGGGGGGTATGTGTACGATGGATATCTTAACGGTCAACTGAATGTTGCTCGAGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGATGGTGGACCCCTGACTTCAGAACCGGAACTTATGAGTACAAAACTGACGAGCGAGGATGAATTTCTGATCATAGGATGTGATGGGATTTGGGATGTATTCAGGAGCCAAAATGCAGTGGATTTCGCCAGGCGCAGGCTCCAGGAGCATAATGACCCAACCTTGTGCAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAGAGTGGAGACAATTTGTCTGCAGTTGTGATTTGCTTCCAGCAGCAACCTCCTCCGAACTTGGTGGCCCCTCGCTCTAGAGTGCACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAGAGTTTCCTCGATAGCTTGGGTAATTGA 1107 0.4679 MEEIEGVDCCSKSESRSSSGTRPPNPNPPSHRQCKLVRHASLMKTNLADVSEPGDVTEDYQSDFFPTLRSGACADIGFRSSMEDVYVCVDNFMHDYGLKNCTDGPSAFYGVFDGHGGKHAADFACQHLPKFILDDEDFPGDIERIVASAFLQTDNAFAEACSLDGALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPSCNKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTSEPELMSTKLTSEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTLCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02917 368 SUPERFAMILY PP2C-like 63 334 IPR036457 -
Vimu10g02917 368 Gene3D - 50 336 IPR036457 -
Vimu10g02917 368 PANTHER PROTEIN PHOSPHATASE 2C 40 330 IPR015655 GO:0004722|GO:0006470
Vimu10g02917 368 MobiDBLite consensus disorder prediction 1 33 - -
Vimu10g02917 368 FunFam Probable protein phosphatase 2C 22 54 335 - -
Vimu10g02917 368 CDD PP2Cc 69 332 IPR001932 -
Vimu10g02917 368 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Vimu10g02917 368 Pfam Protein phosphatase 2C 71 324 IPR001932 -
Vimu10g02917 368 SMART PP2C_4 59 330 IPR001932 -
Vimu10g02917 368 ProSiteProfiles PPM-type phosphatase domain profile. 69 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02917 Vimu-Chr10 40259784 40262049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02917 1 368 PP2C-type Phosphatase Gene Family AT2G25620 66.835 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02917 K14803 - gmx:100815725 675.241