Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02879 ATGAAGGTTGATGGGGAGGGTCAACCGTTGCTGCAACAGCAGCAACAAGAGGTAGCCCCATTGCAAGATAGCTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCACGAGCTTAGCAACATCTTTAATCAACTAGCAACACTTGTTTCCCAACAGGGAGAAGTTGCCATCAGGTTTTTATATTTCTCACTCATGCATTGTATAGATGCATATTTATTGTCCTTTGTTGCTTTATTTAAAATGATATATGATTATATTACAATTACAAGCTTACTTATTTGTCCATTATTGTCCATTATGATCAAGTGA 324 0.3765 MKVDGEGQPLLQQQQQEVAPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRFLYFSLMHCIDAYLLSFVALFKMIYDYITITSLLICPLLSIMIK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02879 107 Gene3D - 2 63 - -
Vimu10g02879 107 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 23 60 IPR000727 -
Vimu10g02879 107 SUPERFAMILY t-snare proteins 11 60 IPR010989 GO:0016020|GO:0016192
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02879 4 63 SNARE and Associated Proteins AT3G24350 67.164 1.98e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02879 K08490 - gmx:100811494 97.4413